RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TLK2Q86UE8 772 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 KLHDC8BQ8IXV7 354 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 SIPA1Q96FS4 1042 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 LRRC3BQ96PB8 259 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 F2RL3Q96RI0 385 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 CDH20Q9HBT6 801 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 FGF21Q9NSA1 209 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 INTS10Q9NVR2 710 aaKnown RBP4.48□□□□□ -1.69
PTCD3-211ENST00000476215 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-211ENST00000476215 PDS5BQ9NTI5 1447 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 IGHV4-61A0A0C4DH41 118 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 AP5Z1O43299 807 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 RECQL5O94762 991 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-211ENST00000476215 CLPTM1O96005 669 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 PLGP00747 810 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-211ENST00000476215 PENKP01210 267 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-211ENST00000476215 IGHV4-59P01825 116 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 EDN1P05305 212 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 PATE4P0C8F1 98 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 SAGP10523 405 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-211ENST00000476215 IRF2P14316 349 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 CA6P23280 308 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 PTAFRP25105 342 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 MAP2K2P36507 400 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 CDR2Q01850 454 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 MZT1Q08AG7 82 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 TAF10Q12962 218 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 PPIGQ13427 754 aaKnown RBP eCLIP4.47□□□□□ -1.69
PTCD3-211ENST00000476215 ZNF876PQ49A33 203 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 GTDC1Q4AE62 458 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 CYP4A22Q5TCH4 519 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 C15orf39Q6ZRI6 1047 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 ERN2Q76MJ5 926 aaKnown RBP4.47□□□□□ -1.69
PTCD3-211ENST00000476215 SLC16A9Q7RTY1 509 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 ADCK2Q7Z695 626 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 MMD2Q8IY49 270 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 EXT2Q93063 718 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 FAM20AQ96MK3 541 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 FSD1Q9BTV5 496 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 PRRG4Q9BZD6 226 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 PFDN4Q9NQP4 134 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 MDFICQ9P1T7 246 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 TRIM17Q9Y577 477 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 LIPGQ9Y5X9 500 aa4.47□□□□□ -1.69
PTCD3-211ENST00000476215 ENO4A6NNW6 628 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 CSN3P07498 182 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 RPL21P46778 160 aaKnown RBP4.46□□□□□ -1.7
PTCD3-211ENST00000476215 ITGA7Q13683 1181 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 RRS1Q15050 365 aaKnown RBP4.46□□□□□ -1.7
PTCD3-211ENST00000476215 P2RY6Q15077 328 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 FAM53AQ6NSI3 398 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-211ENST00000476215 APLFQ8IW19 511 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-211ENST00000476215 LGI2Q8N0V4 545 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 IQUBQ8NA54 791 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 TRIM58Q8NG06 486 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 OR4K1Q8NGD4 311 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 OR52N5Q8NH56 324 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 PIGBQ92521 554 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 DUX3Q96PT4 197 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 PANK2Q9BZ23 570 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 INTS9Q9NV88 658 aaKnown RBP4.46□□□□□ -1.7
PTCD3-211ENST00000476215 STUB1Q9UNE7 303 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 GAB2Q9UQC2 676 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 WDR83OSQ9Y284 106 aa4.46□□□□□ -1.7
PTCD3-211ENST00000476215 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 HHLA1C9JL84 531 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 ARPC2O15144 300 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 TRMUO75648 421 aaKnown RBP4.45□□□□□ -1.7
PTCD3-211ENST00000476215 QDPRP09417 244 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 CFC1BP0CG36 223 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 CFC1P0CG37 223 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 IGHV4-31P0DP07 118 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 MAZP56270 477 aaKnown RBP4.45□□□□□ -1.7
PTCD3-211ENST00000476215 UBASH3AP57075 661 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 ZNF273Q14593 569 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 FAM133BQ5BKY9 247 aaKnown RBP4.45□□□□□ -1.7
PTCD3-211ENST00000476215 C20orf194Q5TEA3 1177 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 PIGZQ86VD9 579 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 CCAR2Q8N163 923 aaKnown RBP4.45□□□□□ -1.7
PTCD3-211ENST00000476215 ANKRD13CQ8N6S4 541 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 BMPERQ8N8U9 685 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 VANGL1Q8TAA9 524 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-211ENST00000476215 FAM76AQ8TAV0 307 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 GIMAP5Q96F15 307 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 FAM71F1Q96KD3 344 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-211ENST00000476215 RMDN2Q96LZ7 410 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 ZMAT2Q96NC0 199 aaKnown RBP4.45□□□□□ -1.7
PTCD3-211ENST00000476215 RAB3IPQ96QF0 476 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-211ENST00000476215 SLC2A11Q9BYW1 496 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 OR2B2Q9GZK3 357 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 FZD8Q9H461 694 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 TRPV4Q9HBA0 871 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 ZCCHC17Q9NP64 241 aaKnown RBP4.45□□□□□ -1.7
PTCD3-211ENST00000476215 FAM207AQ9NSI2 230 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-211ENST00000476215 P4HTMQ9NXG6 502 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 DDX43Q9NXZ2 648 aaKnown RBP4.45□□□□□ -1.7
PTCD3-211ENST00000476215 POLLQ9UGP5 575 aa4.45□□□□□ -1.7
PTCD3-211ENST00000476215 LAMC3Q9Y6N6 1575 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 C2orf81A6NN90 581 aa4.44□□□□□ -1.7
PTCD3-211ENST00000476215 NADKO95544 446 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms