RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 FASTKQ14296 549 aaKnown RBP20.37■□□□□ 0.85
LIME1-204ENST00000476183 FCRL6Q6DN72 434 aa20.37■□□□□ 0.85
LIME1-204ENST00000476183 CNTN4Q8IWV2 1026 aa20.37■□□□□ 0.85
LIME1-204ENST00000476183 PDIK1LQ8N165 341 aa20.37■□□□□ 0.85
LIME1-204ENST00000476183 HMGCLL1Q8TB92 370 aa20.37■□□□□ 0.85
LIME1-204ENST00000476183 CD200R1Q8TD46 325 aa20.37■□□□□ 0.85
LIME1-204ENST00000476183 SLC22A18Q96BI1 424 aa20.37■□□□□ 0.85
LIME1-204ENST00000476183 CLIP3Q96DZ5 547 aa20.37■□□□□ 0.85
LIME1-204ENST00000476183 SNF8Q96H20 258 aa20.37■□□□□ 0.85
LIME1-204ENST00000476183 CHMP2BQ9UQN3 213 aa20.37■□□□□ 0.85
LIME1-204ENST00000476183 DHRS7Q9Y394 339 aa20.37■□□□□ 0.85
LIME1-204ENST00000476183 TEX264Q9Y6I9 313 aa20.37■□□□□ 0.85
LIME1-204ENST00000476183 OR2B3O76000 313 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 KLK3P07288 261 aaPredicted RBP20.36■□□□□ 0.85
LIME1-204ENST00000476183 CAPN1P07384 714 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 PTPN4P29074 926 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 POLE2P56282 527 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 ETF1P62495 437 aaKnown RBP20.36■□□□□ 0.85
LIME1-204ENST00000476183 SF1Q15637 639 aaKnown RBP20.36■□□□□ 0.85
LIME1-204ENST00000476183 CYP2A13Q16696 494 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 PTCHD3Q3KNS1 767 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 TTLL9Q3SXZ7 439 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 ZNF385CQ66K41 422 aaPredicted RBP20.36■□□□□ 0.85
LIME1-204ENST00000476183 CYHR1Q6ZMK1 362 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 NEK10Q6ZWH5 1172 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 SYTL1Q8IYJ3 562 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 OR9A1PQ8NGU1 263 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 MAGEC3Q8TD91 643 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 N4BP2L2Q92802 583 aaPredicted RBP20.36■□□□□ 0.85
LIME1-204ENST00000476183 INPP5DQ92835 1189 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 CERS2Q96G23 380 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 CFAP36Q96G28 342 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 NDNQ99608 321 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 GPR87Q9BY21 358 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 SPATA7Q9P0W8 599 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.36■□□□□ 0.85
LIME1-204ENST00000476183 SNX24Q9Y343 169 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 COMMD10Q9Y6G5 202 aa20.36■□□□□ 0.85
LIME1-204ENST00000476183 EFCAB8A8MWE9 144 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 MYO1CO00159 1063 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 SMAPO00193 183 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 ERGP11308 486 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 CASQ1P31415 396 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 CCR10P46092 362 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 CARSP49589 748 aaKnown RBP20.35■□□□□ 0.85
LIME1-204ENST00000476183 HIF1AQ16665 826 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 STEAP4Q687X5 459 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 TRMT10BQ6PF06 316 aaKnown RBP20.35■□□□□ 0.85
LIME1-204ENST00000476183 FIGLAQ6QHK4 219 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 FAM198BQ6UWH4 519 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 SYT10Q6XYQ8 523 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 CPNE9Q8IYJ1 553 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 GPR135Q8IZ08 494 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 RAB42Q8N4Z0 105 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 SPATA4Q8NEY3 305 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 PKP4Q99569 1192 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 GEMIN8Q9NWZ8 242 aaKnown RBP20.35■□□□□ 0.85
LIME1-204ENST00000476183 EURLQ9NYK6 297 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 ZC3H7BQ9UGR2 993 aaKnown RBP20.35■□□□□ 0.85
LIME1-204ENST00000476183 PLCL2Q9UPR0 1127 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 FARSAQ9Y285 508 aaKnown RBP20.35■□□□□ 0.85
LIME1-204ENST00000476183 PCM1Q15154 2024 aa20.35■□□□□ 0.85
LIME1-204ENST00000476183 CDC14CA4D256 554 aa20.34■□□□□ 0.85
LIME1-204ENST00000476183 AHSGP02765 367 aa20.34■□□□□ 0.85
LIME1-204ENST00000476183 MPC1LP0DKB6 136 aa20.34■□□□□ 0.85
LIME1-204ENST00000476183 GRIA3P42263 894 aa20.34■□□□□ 0.85
LIME1-204ENST00000476183 ARL4CP56559 192 aa20.34■□□□□ 0.85
LIME1-204ENST00000476183 RPS15P62841 145 aaKnown RBP20.34■□□□□ 0.85
LIME1-204ENST00000476183 YBX1P67809 324 aaKnown RBP20.34■□□□□ 0.85
LIME1-204ENST00000476183 IL10RAQ13651 578 aa20.34■□□□□ 0.85
LIME1-204ENST00000476183 RBM20Q5T481 1227 aaKnown RBP20.34■□□□□ 0.85
LIME1-204ENST00000476183 TEDDM1Q5T9Z0 273 aa20.34■□□□□ 0.85
LIME1-204ENST00000476183 FAM69BQ5VUD6 431 aa20.34■□□□□ 0.85
LIME1-204ENST00000476183 ANKMY2Q8IV38 441 aa20.34■□□□□ 0.85
LIME1-204ENST00000476183 MCATQ8IVS2 390 aaKnown RBP20.34■□□□□ 0.85
LIME1-204ENST00000476183 ZNF655Q8N720 491 aaPredicted RBP20.34■□□□□ 0.85
LIME1-204ENST00000476183 OR2A1Q8NGT9 310 aa20.34■□□□□ 0.85
LIME1-204ENST00000476183 ASB11Q8WXH4 323 aa20.34■□□□□ 0.85
LIME1-204ENST00000476183 MIPEPQ99797 713 aa20.34■□□□□ 0.85
LIME1-204ENST00000476183 ZSCAN9O15535 394 aaPredicted RBP20.33■□□□□ 0.85
LIME1-204ENST00000476183 NRP2O60462 931 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 VPS26AO75436 327 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 RECKO95980 971 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 CATP04040 527 aaKnown RBP20.33■□□□□ 0.85
LIME1-204ENST00000476183 CBSLP0DN79 551 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 ENO3P13929 434 aaPredicted RBP20.33■□□□□ 0.85
LIME1-204ENST00000476183 CBSP35520 551 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 CDKN2DP55273 166 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 NFKB2Q00653 900 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 C2orf54Q08AI8 447 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 FASTKD3Q14CZ7 662 aaKnown RBP20.33■□□□□ 0.85
LIME1-204ENST00000476183 KIAA0408Q6ZU52 694 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 PIWIL4Q7Z3Z4 852 aaKnown RBP20.33■□□□□ 0.85
LIME1-204ENST00000476183 ENDOVQ8N8Q3 282 aaKnown RBP20.33■□□□□ 0.85
LIME1-204ENST00000476183 OR2L3Q8NG85 312 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 LRRC39Q96DD0 335 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 SLC7A5P2Q9GIP4 190 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 ADNPQ9H2P0 1102 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 FAM114A2Q9NRY5 505 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 STARD5Q9NSY2 213 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms