RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 BTKQ06187 659 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 ALG11Q2TAA5 492 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 C18orf21Q32NC0 220 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-227ENST00000475832 THEMIS2Q5TEJ8 643 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 CAPRIN2Q6IMN6 1127 aaKnown RBP11.88□□□□□ -0.51
MRPL55-227ENST00000475832 C6orf89Q6UWU4 347 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 WASH2PQ6VEQ5 465 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 SYVN1Q86TM6 617 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 THOC6Q86W42 341 aaKnown RBP11.88□□□□□ -0.51
MRPL55-227ENST00000475832 RGL4Q8IZJ4 473 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 OR56A3Q8NH54 315 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 ACTRT2Q8TDY3 377 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 SETD7Q8WTS6 366 aaKnown RBP11.88□□□□□ -0.51
MRPL55-227ENST00000475832 TWIST2Q8WVJ9 160 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 GAB3Q8WWW8 586 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 SH3KBP1Q96B97 665 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 ERP27Q96DN0 273 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 C19orf60Q96EN9 201 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 HSPA12BQ96MM6 686 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 SLC6A18Q96N87 628 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 HAUS8Q9BT25 410 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 ATG10Q9H0Y0 220 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 MEAF6Q9HAF1 191 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 EBF2Q9HAK2 575 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 ZBTB26Q9HCK0 441 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 PRM3Q9NNZ6 103 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 WASH6PQ9NQA3 447 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 CCDC177Q9NQR7 707 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-227ENST00000475832 SNX6Q9UNH7 406 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 PCYT1BQ9Y5K3 369 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-227ENST00000475832 LAMA1P25391 3075 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 OR5K4A6NMS3 321 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 TMEM233B4DJY2 109 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 FCHO1O14526 889 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 OR7A17O14581 309 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 ZNF195O14628 629 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 UGDHO60701 494 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 HNRNPCL1O60812 293 aaKnown RBP11.87□□□□□ -0.51
MRPL55-227ENST00000475832 FUCA1P04066 466 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 GNAZP19086 355 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 ITPKAP23677 461 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 IMPA1P29218 277 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 EPHA3P29320 983 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 RASSF2P50749 326 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 INHBCP55103 352 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 IRF8Q02556 426 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 TSTA3Q13630 321 aaPredicted RBP11.87□□□□□ -0.51
MRPL55-227ENST00000475832 TEAD4Q15561 434 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 ZRSR2Q15696 482 aaKnown RBP11.87□□□□□ -0.51
MRPL55-227ENST00000475832 HIST2H2ACQ16777 129 aaPredicted RBP11.87□□□□□ -0.51
MRPL55-227ENST00000475832 SLC9B1Q4ZJI4 515 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 VWA5B1Q5TIE3 1220 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 LIPJQ5W064 366 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 CLEC6AQ6EIG7 209 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 HIST2H2AA3Q6FI13 130 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 FOXR1Q6PIV2 292 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 ABRAXAS1Q6UWZ7 409 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 ATG14Q6ZNE5 492 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 TRIM48Q8IWZ4 208 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 PHACTR4Q8IZ21 702 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 DEFB119Q8N690 84 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 FRMD1Q8N878 549 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 CDYL2Q8N8U2 506 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 SPDYE1Q8NFV5 336 aaPredicted RBP11.87□□□□□ -0.51
MRPL55-227ENST00000475832 OR4F6Q8NGB9 312 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 OR5AR1Q8NGP9 310 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 ZNF480Q8WV37 535 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 REPS1Q96D71 796 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 CXorf40BQ96DE9 158 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 ZC3H10Q96K80 434 aaKnown RBP11.87□□□□□ -0.51
MRPL55-227ENST00000475832 INSM2Q96T92 566 aaPredicted RBP11.87□□□□□ -0.51
MRPL55-227ENST00000475832 EBF4Q9BQW3 602 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 DUSP15Q9H1R2 295 aaPredicted RBP11.87□□□□□ -0.51
MRPL55-227ENST00000475832 SAR1AQ9NR31 198 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 TXLNGQ9NUQ3 528 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 ABCF3Q9NUQ8 709 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 SLC22A14Q9Y267 594 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 ASB1Q9Y576 335 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 LRRK1Q38SD2 2015 aa11.87□□□□□ -0.51
MRPL55-227ENST00000475832 TLR4O00206 839 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 SLC28A1O00337 649 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 RGS14O43566 566 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 ULK1O75385 1050 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 CAPN1P07384 714 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 MTHFD1P11586 935 aaKnown RBP11.86□□□□□ -0.51
MRPL55-227ENST00000475832 GNSP15586 552 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 HNF4AP41235 474 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 ERVPABLB-1P60509 514 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 STX1BP61266 288 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 TBPL1P62380 186 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 TRAF3Q13114 568 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 PRKG2Q13237 762 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 SRSF5Q13243 272 aaKnown RBP11.86□□□□□ -0.51
MRPL55-227ENST00000475832 LAPTM5Q13571 262 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 FZD2Q14332 565 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 ELOCQ15369 112 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 RPE65Q16518 533 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 IMPG1Q17R60 797 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 CCSMST1Q4G0I0 132 aa11.86□□□□□ -0.51
MRPL55-227ENST00000475832 GGTA1PQ4G0N0 100 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms