RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 LINGO1Q96FE5 620 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 MED30Q96HR3 178 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 SEMA3CQ99985 751 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 TMEM246Q9BRR3 403 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 PLCXD1Q9NUJ7 323 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 PSORS1C1Q9UIG5 152 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 TRMT6Q9UJA5 497 aaKnown RBP17.31■□□□□ 0.36
CCM2-207ENST00000475551 SNX6Q9UNH7 406 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 TMA7Q9Y2S6 64 aaKnown RBP17.31■□□□□ 0.36
CCM2-207ENST00000475551 TNPO3Q9Y5L0 923 aaKnown RBP17.31■□□□□ 0.36
CCM2-207ENST00000475551 SMIM35A0A1B0GVV1 85 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 MYO1GB0I1T2 1018 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 RGS14O43566 566 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 CNPP09543 421 aaKnown RBP17.3■□□□□ 0.36
CCM2-207ENST00000475551 GRK5P34947 590 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 SLC15A1P46059 708 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 NPRL3Q12980 569 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 GALNT3Q14435 633 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 FBXO43Q4G163 708 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 LRIF1Q5T3J3 769 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 PIK3R6Q5UE93 754 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 MLIPQ5VWP3 458 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 C10orf111Q8N326 155 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 SIDT2Q8NBJ9 832 aaKnown RBP17.3■□□□□ 0.36
CCM2-207ENST00000475551 GPRC5AQ8NFJ5 357 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 SETD6Q8TBK2 473 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 GTF3C2Q8WUA4 911 aaPredicted RBP17.3■□□□□ 0.36
CCM2-207ENST00000475551 MYDGFQ969H8 173 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 OR52E6Q96RD3 313 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 PRDM5Q9NQX1 630 aaPredicted RBP17.3■□□□□ 0.36
CCM2-207ENST00000475551 SLC6A13Q9NSD5 602 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 TRMT13Q9NUP7 481 aaKnown RBP17.3■□□□□ 0.36
CCM2-207ENST00000475551 TMEM248Q9NWD8 314 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 TRAPPC4Q9Y296 219 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 WNT9AO14904 365 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 SEMA3DO95025 777 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 PIRTP0C851 137 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 PKMP14618 531 aaKnown RBP17.3■□□□□ 0.36
CCM2-207ENST00000475551 PBX3P40426 434 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 ADCYAP1R1P41586 468 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 ABHD18Q0P651 414 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 CRHR2Q13324 411 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 LRRC26Q2I0M4 334 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 VN1R5Q7Z5H4 357 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 P3H2Q8IVL5 708 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 TRIM63Q969Q1 353 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 ZFP42Q96MM3 310 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 KIF17Q9P2E2 1029 aa17.3■□□□□ 0.36
CCM2-207ENST00000475551 CRNNQ9UBG3 495 aaPredicted RBP17.3■□□□□ 0.36
CCM2-207ENST00000475551 A0A096LPI6 279 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 H3BQ06 376 aaPredicted RBP17.29■□□□□ 0.36
CCM2-207ENST00000475551 OTCP00480 354 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 TRAPPC2P0DI81 140 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 TRAPPC2BP0DI82 140 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 C21orf33P30042 268 aaPredicted RBP17.29■□□□□ 0.36
CCM2-207ENST00000475551 PIK3CBP42338 1070 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 ZNF140P52738 457 aaPredicted RBP17.29■□□□□ 0.36
CCM2-207ENST00000475551 GTF2H2Q13888 395 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 BCL7AQ4VC05 210 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 CACHD1Q5VU97 1274 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 NXNL2Q5VZ03 156 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 GTF2H2CQ6P1K8 395 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 FAM171BQ6P995 826 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 UTS2BQ765I0 119 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 ZNF683Q8IZ20 524 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 LIX1Q8N485 282 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 PAF1Q8N7H5 531 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 CD200R1Q8TD46 325 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 TMCO6Q96DC7 493 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 GDF15Q99988 308 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 ZYG11BQ9C0D3 744 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 POLR1EQ9GZS1 481 aaKnown RBP17.29■□□□□ 0.36
CCM2-207ENST00000475551 KCNH6Q9H252 994 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 ADPRHL2Q9NX46 363 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 ASIC5Q9NY37 505 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 TBC1D24Q9ULP9 559 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 VPS9D1Q9Y2B5 631 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 BTBD3Q9Y2F9 522 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 GJB3O75712 270 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 MMP3P08254 477 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 PARP15Q460N3 678 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 FAHD1Q6P587 224 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 RNF165Q6ZSG1 346 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 ARMCX6Q7L4S7 300 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 GRPEL2Q8TAA5 225 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 HRASLS5Q96KN8 279 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 CEP295NLQ96MC4 621 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 RTP3Q9BQQ7 232 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 FKBP14Q9NWM8 211 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 TAS2R9Q9NYW1 312 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 MAN2B2Q9Y2E5 1009 aa17.29■□□□□ 0.36
CCM2-207ENST00000475551 LOC100506127A0A0U1RQW1 187 aa17.28■□□□□ 0.36
CCM2-207ENST00000475551 SLC28A1O00337 649 aa17.28■□□□□ 0.36
CCM2-207ENST00000475551 UGT2B17O75795 530 aa17.28■□□□□ 0.36
CCM2-207ENST00000475551 ZNF682O95780 498 aa17.28■□□□□ 0.36
CCM2-207ENST00000475551 SEMG1P04279 462 aa17.28■□□□□ 0.36
CCM2-207ENST00000475551 CDK1P06493 297 aa17.28■□□□□ 0.36
CCM2-207ENST00000475551 MYCLP1P12525 358 aaPredicted RBP17.28■□□□□ 0.36
CCM2-207ENST00000475551 SOX6P35712 828 aa17.28■□□□□ 0.36
CCM2-207ENST00000475551 IL10RBQ08334 325 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms