RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 PRM3Q9NNZ6 103 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 SDR39U1Q9NRG7 319 aaPredicted RBP19.21■□□□□ 0.67
SSR1-204ENST00000474597 GPRC5BQ9NZH0 403 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 WNT16Q9UBV4 365 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 CA5BQ9Y2D0 317 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 CFAP20Q9Y6A4 193 aaKnown RBP19.21■□□□□ 0.67
SSR1-204ENST00000474597 FAM170BA6NMN3 283 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 A8MUI8 341 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 E7EQ34 232 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 LATO43561 262 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 CIB2O75838 187 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 PDYNP01213 254 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 IGLV3-19P01714 112 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 SLC2A4P14672 509 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 GNAZP19086 355 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 IDSP22304 550 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 OXTRP30559 389 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 EMX2Q04743 252 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 GRIK2Q13002 908 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 PARP9Q8IXQ6 854 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 ZNF687Q8N1G0 1237 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 C12orf66Q96MD2 445 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 WDR92Q96MX6 357 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 HHIPQ96QV1 700 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 OR2M4Q96R27 311 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 OR4K3Q96R72 315 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 NPAS2Q99743 824 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 CARS2Q9HA77 564 aaKnown RBP19.21■□□□□ 0.67
SSR1-204ENST00000474597 CCDC177Q9NQR7 707 aaPredicted RBP19.21■□□□□ 0.67
SSR1-204ENST00000474597 NOP53Q9NZM5 478 aaKnown RBP19.21■□□□□ 0.67
SSR1-204ENST00000474597 BAIAP2L1Q9UHR4 511 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 GPR45Q9Y5Y3 372 aa19.21■□□□□ 0.67
SSR1-204ENST00000474597 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.21■□□□□ 0.67
SSR1-204ENST00000474597 KRBA1A5PL33 1030 aa19.2■□□□□ 0.66
SSR1-204ENST00000474597 H0Y8X5 98 aa19.2■□□□□ 0.66
SSR1-204ENST00000474597 HNF4AP41235 474 aa19.2■□□□□ 0.66
SSR1-204ENST00000474597 THOP1P52888 689 aa19.2■□□□□ 0.66
SSR1-204ENST00000474597 TBL3Q12788 808 aaKnown RBP19.2■□□□□ 0.66
SSR1-204ENST00000474597 PRKG2Q13237 762 aa19.2■□□□□ 0.66
SSR1-204ENST00000474597 THEMIS2Q5TEJ8 643 aa19.2■□□□□ 0.66
SSR1-204ENST00000474597 C6orf163Q5TEZ5 329 aa19.2■□□□□ 0.66
SSR1-204ENST00000474597 ULK2Q8IYT8 1036 aa19.2■□□□□ 0.66
SSR1-204ENST00000474597 TBC1D21Q8IYX1 336 aa19.2■□□□□ 0.66
SSR1-204ENST00000474597 DSELQ8IZU8 1212 aa19.2■□□□□ 0.66
SSR1-204ENST00000474597 TOE1Q96GM8 510 aaKnown RBP19.2■□□□□ 0.66
SSR1-204ENST00000474597 SCARF2Q96GP6 870 aaPredicted RBP19.2■□□□□ 0.66
SSR1-204ENST00000474597 FGF22Q9HCT0 170 aa19.2■□□□□ 0.66
SSR1-204ENST00000474597 NR5A2O00482 541 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 WFS1O76024 890 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 APBB3O95704 486 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 CCND1P24385 295 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 MRPL19P49406 292 aaKnown RBP19.19■□□□□ 0.66
SSR1-204ENST00000474597 STARD6P59095 220 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 RPL38P63173 70 aaKnown RBP19.19■□□□□ 0.66
SSR1-204ENST00000474597 HMGCS1Q01581 520 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 DOC2AQ14183 400 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 SMU1Q2TAY7 513 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 PDCD4Q53EL6 469 aaKnown RBP19.19■□□□□ 0.66
SSR1-204ENST00000474597 FRG2Q64ET8 278 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 KIAA0895LQ68EN5 471 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 GRHL2Q6ISB3 625 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 RGL4Q8IZJ4 473 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 RAB42Q8N4Z0 105 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 BMFQ96LC9 184 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 FRG2BQ96QU4 278 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 FERD3LQ96RJ6 166 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 NELL2Q99435 816 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 BRINP2Q9C0B6 783 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 C6orf106Q9H6K1 298 aaPredicted RBP19.19■□□□□ 0.66
SSR1-204ENST00000474597 LRTM1Q9HBL6 345 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 PLAGL1Q9UM63 463 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 EIF3LQ9Y262 564 aaKnown RBP19.19■□□□□ 0.66
SSR1-204ENST00000474597 PLEKHM1Q9Y4G2 1056 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 CCL27Q9Y4X3 112 aa19.19■□□□□ 0.66
SSR1-204ENST00000474597 ZNF839A8K0R7 811 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 E7ENX8 843 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 PI15O43692 258 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 PRAMEF4O60810 478 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 SEC22BO75396 215 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 SLC22A3O75751 556 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 HSD17B2P37059 387 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 CCR5P51681 352 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 RAP1GDS1P52306 607 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 TAP2Q03519 686 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 KRT33BQ14525 404 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 PRAMEF9Q5VWM5 478 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 REP15Q6BDI9 236 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 CAPRIN2Q6IMN6 1127 aaKnown RBP19.18■□□□□ 0.66
SSR1-204ENST00000474597 GCNT7Q6ZNI0 430 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 TMPRSS11BQ86T26 416 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 SIX5Q8N196 739 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 CLPTM1LQ96KA5 538 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 SGPP1Q9BX95 441 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 FOXQ1Q9C009 403 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 POLR3HQ9Y535 204 aaPredicted RBP19.18■□□□□ 0.66
SSR1-204ENST00000474597 HS3ST3A1Q9Y663 406 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 BBIP1A8MTZ0 92 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 PDZK1P1A8MUH7 402 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 PRAMEF26H0Y7S4 382 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 SCAMP1O15126 338 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms