RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 ZNF354BQ96LW1 612 aa3.24□□□□□ -1.89
TMEM50B-208ENST00000474272 UPF2Q9HAU5 1272 aaKnown RBP3.24□□□□□ -1.89
TMEM50B-208ENST00000474272 A4GALTQ9NPC4 353 aa3.24□□□□□ -1.89
TMEM50B-208ENST00000474272 SH3GLB2Q9NR46 395 aa3.24□□□□□ -1.89
TMEM50B-208ENST00000474272 SERINC1Q9NRX5 453 aa3.24□□□□□ -1.89
TMEM50B-208ENST00000474272 ACAD8Q9UKU7 415 aa3.24□□□□□ -1.89
TMEM50B-208ENST00000474272 ATAD2BQ9ULI0 1458 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 A0A1W2PRQ8 180 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 NEMP2A6NFY4 417 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 KRTAP16-1A8MUX0 517 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 SLC22A2O15244 555 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 RNASEH1O60930 286 aaKnown RBP3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 PENKP01210 267 aaPredicted RBP3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 IGHV2-70P01814 119 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 SMIM18P0DKX4 95 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 FDPSP14324 419 aaKnown RBP3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 HSPA4P34932 840 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 LHX1P48742 406 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 PDX1P52945 283 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 POLR2LP62875 67 aaKnown RBP3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 MZT1Q08AG7 82 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 ZNF415Q09FC8 603 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 TFCP2Q12800 502 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 CA9Q16790 459 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 TECRLQ5HYJ1 363 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 WDR38Q5JTN6 314 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 ELFN2Q5R3F8 820 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 CCNYL2Q5T2Q4 361 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 ERN2Q76MJ5 926 aaKnown RBP3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 ARHGAP22Q7Z5H3 698 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 GTSCR1Q86UQ5 136 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 SPAG16Q8N0X2 631 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 CCAR2Q8N163 923 aaKnown RBP3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 NKAIN3Q8N8D7 197 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 PPFIBP2Q8ND30 876 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 OR11H4Q8NGC9 324 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 OR1J1Q8NGS3 322 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 IRGQQ8WZA9 623 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 MOB3AQ96BX8 217 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 SIPA1Q96FS4 1042 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 FEVQ99581 238 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 RTP3Q9BQQ7 232 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 S1PR5Q9H228 398 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 FZD8Q9H461 694 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 ZBTB20Q9HC78 741 aaPredicted RBP3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 GKN1Q9NS71 199 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 FAM118AQ9NWS6 357 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 STK26Q9P289 416 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 DAPK2Q9UIK4 370 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 CPSF3Q9UKF6 684 aaKnown RBP3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 SLC7A7Q9UM01 511 aa3.23□□□□□ -1.89
TMEM50B-208ENST00000474272 KIF21BO75037 1637 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 FLT1P17948 1338 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 A0A1W2PPK0 400 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 CLDN4O14493 209 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 CLIC2O15247 247 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 AP5Z1O43299 807 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 CSN3P07498 182 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 IGHV4-38-2P0DP08 117 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 HSPA8P11142 646 aaKnown RBP3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 PAX1P15863 534 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 IFNAR1P17181 557 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 GNAZP19086 355 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 CHRNB4P30926 498 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 PTGER4P35408 488 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 ASCL1P50553 236 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 CDH11P55287 796 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 DSCR10P59022 87 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 GNB1P62873 340 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 ROR1Q01973 937 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 LGALS3BPQ08380 585 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 UGP2Q16851 508 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 ZC2HC1CQ53FD0 456 aaPredicted RBP3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 TCTE1Q5JU00 501 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 DCLRE1AQ6PJP8 1040 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 ZNF554Q86TJ5 538 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 TLK2Q86UE8 772 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 TMEM139Q8IV31 216 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 MFN1Q8IWA4 741 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 ANKRD13CQ8N6S4 541 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 BMPERQ8N8U9 685 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 IQUBQ8NA54 791 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 CCDC107Q8WV48 283 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 FCAMRQ8WWV6 532 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 HSD17B8Q92506 261 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 EXT2Q93063 718 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 SENP5Q96HI0 755 aaPredicted RBP3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 LAT2Q9GZY6 243 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 COQ3Q9NZJ6 369 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 TMED3Q9Y3Q3 217 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 CUX2O14529 1486 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 NCAPD3P42695 1498 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 PRXQ9BXM0 1461 aa3.22□□□□□ -1.89
TMEM50B-208ENST00000474272 RRBP1Q9P2E9 1410 aaKnown RBP3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 MAP3K1Q13233 1512 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 SMIM1B2RUZ4 78 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 HHLA1C9JL84 531 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 BLOC1S5-TXNDC5H3BN57 136 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 DNM1LO00429 736 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 PLOD2O00469 737 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms