RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 FSD1LQ9BXM9 530 aa19.5■□□□□ 0.71
APP-215ENST00000474136 SRMSQ9H3Y6 488 aa19.5■□□□□ 0.71
APP-215ENST00000474136 ZDHHC18Q9NUE0 388 aa19.5■□□□□ 0.71
APP-215ENST00000474136 NFU1Q9UMS0 254 aa19.5■□□□□ 0.71
APP-215ENST00000474136 NOVA2Q9UNW9 492 aaKnown RBP19.5■□□□□ 0.71
APP-215ENST00000474136 COLEC10Q9Y6Z7 277 aa19.5■□□□□ 0.71
APP-215ENST00000474136 CCDC151A5D8V7 595 aa19.49■□□□□ 0.71
APP-215ENST00000474136 MSH3P20585 1137 aa19.49■□□□□ 0.71
APP-215ENST00000474136 NDUFS1P28331 727 aa19.49■□□□□ 0.71
APP-215ENST00000474136 ARL4CP56559 192 aa19.49■□□□□ 0.71
APP-215ENST00000474136 VSNL1P62760 191 aa19.49■□□□□ 0.71
APP-215ENST00000474136 CBLBQ13191 982 aa19.49■□□□□ 0.71
APP-215ENST00000474136 SIRPB2Q5JXA9 342 aa19.49■□□□□ 0.71
APP-215ENST00000474136 ARMC3Q5W041 872 aa19.49■□□□□ 0.71
APP-215ENST00000474136 PDIK1LQ8N165 341 aa19.49■□□□□ 0.71
APP-215ENST00000474136 TAB3Q8N5C8 712 aaPredicted RBP19.49■□□□□ 0.71
APP-215ENST00000474136 LCN9Q8WX39 176 aa19.49■□□□□ 0.71
APP-215ENST00000474136 WDR77Q9BQA1 342 aaPredicted RBP19.49■□□□□ 0.71
APP-215ENST00000474136 PITPNM3Q9BZ71 974 aa19.49■□□□□ 0.71
APP-215ENST00000474136 TRABDQ9H4I3 376 aa19.49■□□□□ 0.71
APP-215ENST00000474136 CDYLQ9Y232 598 aa19.49■□□□□ 0.71
APP-215ENST00000474136 FER1L5A0AVI2 2057 aa19.48■□□□□ 0.71
APP-215ENST00000474136 EIF3HO15372 352 aaKnown RBP eCLIP19.48■□□□□ 0.71
APP-215ENST00000474136 HCRTR1O43613 425 aa19.48■□□□□ 0.71
APP-215ENST00000474136 ALOX12BO75342 701 aa19.48■□□□□ 0.71
APP-215ENST00000474136 HBQ1P09105 142 aa19.48■□□□□ 0.71
APP-215ENST00000474136 WNT3AP56704 352 aa19.48■□□□□ 0.71
APP-215ENST00000474136 SOX8P57073 446 aa19.48■□□□□ 0.71
APP-215ENST00000474136 ZDHHC20Q5W0Z9 365 aa19.48■□□□□ 0.71
APP-215ENST00000474136 EMBQ6PCB8 327 aa19.48■□□□□ 0.71
APP-215ENST00000474136 KDELC1Q6UW63 502 aa19.48■□□□□ 0.71
APP-215ENST00000474136 ZDHHC24Q6UX98 284 aa19.48■□□□□ 0.71
APP-215ENST00000474136 FJX1Q86VR8 437 aa19.48■□□□□ 0.71
APP-215ENST00000474136 CFAP206Q8IYR0 622 aa19.48■□□□□ 0.71
APP-215ENST00000474136 ACVR1CQ8NER5 493 aa19.48■□□□□ 0.71
APP-215ENST00000474136 BLOC1S5Q8TDH9 187 aa19.48■□□□□ 0.71
APP-215ENST00000474136 OXNAD1Q96HP4 312 aaPredicted RBP19.48■□□□□ 0.71
APP-215ENST00000474136 SPRTNQ9H040 489 aaPredicted RBP19.48■□□□□ 0.71
APP-215ENST00000474136 FAM60AQ9NP50 221 aa19.48■□□□□ 0.71
APP-215ENST00000474136 GPN3Q9UHW5 284 aaPredicted RBP19.48■□□□□ 0.71
APP-215ENST00000474136 SVILO95425 2214 aa19.47■□□□□ 0.71
APP-215ENST00000474136 CELSR1Q9NYQ6 3014 aa19.47■□□□□ 0.71
APP-215ENST00000474136 LOC285095A0A1B0GVY8 99 aa19.47■□□□□ 0.71
APP-215ENST00000474136 MATN2O00339 956 aa19.47■□□□□ 0.71
APP-215ENST00000474136 SGTAO43765 313 aa19.47■□□□□ 0.71
APP-215ENST00000474136 KLHL41O60662 606 aa19.47■□□□□ 0.71
APP-215ENST00000474136 IGHEP01854 428 aa19.47■□□□□ 0.71
APP-215ENST00000474136 CTSBP07858 339 aa19.47■□□□□ 0.71
APP-215ENST00000474136 UMODP07911 640 aa19.47■□□□□ 0.71
APP-215ENST00000474136 ITGA3P26006 1051 aa19.47■□□□□ 0.71
APP-215ENST00000474136 ITGA9Q13797 1035 aa19.47■□□□□ 0.71
APP-215ENST00000474136 SLMAPQ14BN4 828 aa19.47■□□□□ 0.71
APP-215ENST00000474136 TRADDQ15628 312 aa19.47■□□□□ 0.71
APP-215ENST00000474136 DEFB110Q30KQ9 67 aa19.47■□□□□ 0.71
APP-215ENST00000474136 LRRC8BQ6P9F7 803 aa19.47■□□□□ 0.71
APP-215ENST00000474136 CENPUQ71F23 418 aa19.47■□□□□ 0.71
APP-215ENST00000474136 GLT6D1Q7Z4J2 308 aa19.47■□□□□ 0.71
APP-215ENST00000474136 OR2Y1Q8NGV0 311 aa19.47■□□□□ 0.71
APP-215ENST00000474136 LRRC39Q96DD0 335 aa19.47■□□□□ 0.71
APP-215ENST00000474136 GBP5Q96PP8 586 aa19.47■□□□□ 0.71
APP-215ENST00000474136 FERD3LQ96RJ6 166 aa19.47■□□□□ 0.71
APP-215ENST00000474136 TBL1YQ9BQ87 522 aa19.47■□□□□ 0.71
APP-215ENST00000474136 ARNT2Q9HBZ2 717 aa19.47■□□□□ 0.71
APP-215ENST00000474136 ATP13A2Q9NQ11 1180 aa19.47■□□□□ 0.71
APP-215ENST00000474136 SMOXQ9NWM0 555 aa19.47■□□□□ 0.71
APP-215ENST00000474136 IFT80Q9P2H3 777 aaPredicted RBP19.47■□□□□ 0.71
APP-215ENST00000474136 DHCR7Q9UBM7 475 aaKnown RBP19.47■□□□□ 0.71
APP-215ENST00000474136 CCDC88CQ9P219 2028 aa19.46■□□□□ 0.71
APP-215ENST00000474136 H3BMH7 237 aa19.46■□□□□ 0.71
APP-215ENST00000474136 TP73O15350 636 aa19.46■□□□□ 0.71
APP-215ENST00000474136 EDN3P14138 238 aa19.46■□□□□ 0.71
APP-215ENST00000474136 NPY2RP49146 381 aa19.46■□□□□ 0.71
APP-215ENST00000474136 CDH17Q12864 832 aa19.46■□□□□ 0.71
APP-215ENST00000474136 CYP2A13Q16696 494 aa19.46■□□□□ 0.71
APP-215ENST00000474136 DNAJC21Q5F1R6 531 aaKnown RBP19.46■□□□□ 0.71
APP-215ENST00000474136 RANBP10Q6VN20 620 aa19.46■□□□□ 0.71
APP-215ENST00000474136 TRIM73Q86UV7 250 aa19.46■□□□□ 0.71
APP-215ENST00000474136 GPR135Q8IZ08 494 aa19.46■□□□□ 0.71
APP-215ENST00000474136 IPMKQ8NFU5 416 aa19.46■□□□□ 0.71
APP-215ENST00000474136 ZNF398Q8TD17 642 aa19.46■□□□□ 0.71
APP-215ENST00000474136 FAR1Q8WVX9 515 aa19.46■□□□□ 0.71
APP-215ENST00000474136 C17orf62Q9BQA9 187 aa19.46■□□□□ 0.71
APP-215ENST00000474136 GORASP1Q9BQQ3 440 aa19.46■□□□□ 0.71
APP-215ENST00000474136 XKR8Q9H6D3 395 aa19.46■□□□□ 0.71
APP-215ENST00000474136 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.46■□□□□ 0.71
APP-215ENST00000474136 NDOR1Q9UHB4 597 aa19.46■□□□□ 0.71
APP-215ENST00000474136 ZGRF1Q86YA3 2104 aa19.45■□□□□ 0.7
APP-215ENST00000474136 CNTRLQ7Z7A1 2325 aa19.45■□□□□ 0.7
APP-215ENST00000474136 ZFHX3Q15911 3703 aa19.45■□□□□ 0.7
APP-215ENST00000474136 MAP3K7O43318 606 aa19.45■□□□□ 0.7
APP-215ENST00000474136 ECHS1P30084 290 aa19.45■□□□□ 0.7
APP-215ENST00000474136 ADRA1AP35348 466 aa19.45■□□□□ 0.7
APP-215ENST00000474136 DCDP81605 110 aaKnown RBP19.45■□□□□ 0.7
APP-215ENST00000474136 ZIC1Q15915 447 aa19.45■□□□□ 0.7
APP-215ENST00000474136 BCL7AQ4VC05 210 aa19.45■□□□□ 0.7
APP-215ENST00000474136 ANKRD22Q5VYY1 191 aa19.45■□□□□ 0.7
APP-215ENST00000474136 RHBDD2Q6NTF9 364 aa19.45■□□□□ 0.7
APP-215ENST00000474136 DNAAF3Q8N9W5 541 aa19.45■□□□□ 0.7
APP-215ENST00000474136 PHC3Q8NDX5 983 aa19.45■□□□□ 0.7
APP-215ENST00000474136 OR52E1Q8NGJ3 308 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms