RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 NOP53Q9NZM5 478 aaKnown RBP17.47■□□□□ 0.39
VARS2-206ENST00000473916 SEC22BO75396 215 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 ACP5P13686 325 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 SMAD4Q13485 552 aaKnown RBP17.47■□□□□ 0.39
VARS2-206ENST00000473916 SKIV2LQ15477 1246 aaKnown RBP17.47■□□□□ 0.39
VARS2-206ENST00000473916 DUS1LQ6P1R4 473 aaKnown RBP17.47■□□□□ 0.39
VARS2-206ENST00000473916 RNF165Q6ZSG1 346 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 CHST15Q7LFX5 561 aaPredicted RBP17.47■□□□□ 0.39
VARS2-206ENST00000473916 HORMAD1Q86X24 394 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 SYTL1Q8IYJ3 562 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 FLCNQ8NFG4 579 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 CLHC1Q8NHS4 586 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 NRG4Q8WWG1 115 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 ATL1Q8WXF7 558 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 ZIM2Q9NZV7 527 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 SLAMF8Q9P0V8 285 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 CROTQ9UKG9 612 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 ASF1AQ9Y294 204 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 NDUFAF1Q9Y375 327 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 PRORSD1PA6NEY8 169 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 BBIP1A8MTZ0 92 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 MAP3K7O43318 606 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 ANP32DO95626 131 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 JUPP14923 745 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 ACSL1P33121 698 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 GNPDA1P46926 289 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 DGKQP52824 942 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 CLDN2P57739 230 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 KCNK10P57789 538 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 PRKG2Q13237 762 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 CCINQ13939 588 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 KIAA1161Q6NSJ0 714 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 Q6ZS52 159 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 PDZD3Q86UT5 571 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 LIX1Q8N485 282 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 CHCHD4Q8N4Q1 142 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 OXR1Q8N573 874 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 FBXO15Q8NCQ5 510 aaPredicted RBP17.46■□□□□ 0.39
VARS2-206ENST00000473916 SLC26A7Q8TE54 656 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 DNASE1L2Q92874 299 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 NEIL2Q969S2 332 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 SERPINI1Q99574 410 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 NDRG2Q9UN36 371 aaKnown RBP17.46■□□□□ 0.39
VARS2-206ENST00000473916 SNX6Q9UNH7 406 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 DLGAP4Q9Y2H0 992 aa17.46■□□□□ 0.39
VARS2-206ENST00000473916 TCRBV21S2A2A0A5A6 115 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 LMNAP02545 664 aaKnown RBP17.45■□□□□ 0.38
VARS2-206ENST00000473916 MYCLP1P12525 358 aaPredicted RBP17.45■□□□□ 0.38
VARS2-206ENST00000473916 CASP2P42575 452 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 PTDSS1P48651 473 aaKnown RBP17.45■□□□□ 0.38
VARS2-206ENST00000473916 SLC7A2P52569 658 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 MRPS21P82921 87 aaKnown RBP17.45■□□□□ 0.38
VARS2-206ENST00000473916 DDX39BQ13838 428 aaKnown RBP17.45■□□□□ 0.38
VARS2-206ENST00000473916 KIAA0040Q15053 153 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 FRG2Q64ET8 278 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 RNF111Q6ZNA4 994 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 ZFAND4Q86XD8 727 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 KLHDC8AQ8IYD2 350 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 OR9A1PQ8NGU1 263 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 APIPQ96GX9 242 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 FRG2BQ96QU4 278 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 MTERF1Q99551 399 aaKnown RBP17.45■□□□□ 0.38
VARS2-206ENST00000473916 PCDHAC1Q9H158 963 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 PHPT1Q9NRX4 125 aaPredicted RBP17.45■□□□□ 0.38
VARS2-206ENST00000473916 C1orf109Q9NX04 203 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 COLQQ9Y215 455 aaPredicted RBP17.45■□□□□ 0.38
VARS2-206ENST00000473916 WDR37Q9Y2I8 494 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 A0A1W2PP18 115 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 FAM234BA2RU67 622 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 POM121BA6NF01 834 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 CCDC154A6NI56 674 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 H0Y8X5 98 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 CEACAM5P06731 702 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 ME2P23368 584 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 GRIK2Q13002 908 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 TLR1Q15399 786 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 CATSPEREQ5SY80 951 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 METRNLQ641Q3 311 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 SLC2A7Q6PXP3 512 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 HACD2Q6Y1H2 254 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 LRRC56Q8IYG6 542 aaPredicted RBP17.45■□□□□ 0.38
VARS2-206ENST00000473916 KRTCAP2Q8N6L1 136 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 FAM3CQ92520 227 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 GPATCH1Q9BRR8 931 aaKnown RBP17.45■□□□□ 0.38
VARS2-206ENST00000473916 FBRSQ9HAH7 460 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 SPAG4Q9NPE6 437 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 STX18Q9P2W9 335 aaKnown RBP17.45■□□□□ 0.38
VARS2-206ENST00000473916 KCNK6Q9Y257 313 aa17.45■□□□□ 0.38
VARS2-206ENST00000473916 TDRKHQ9Y2W6 561 aaKnown RBP17.45■□□□□ 0.38
VARS2-206ENST00000473916 SH3BGRLO75368 114 aa17.44■□□□□ 0.38
VARS2-206ENST00000473916 MAPK9P45984 424 aa17.44■□□□□ 0.38
VARS2-206ENST00000473916 TAP2Q03519 686 aa17.44■□□□□ 0.38
VARS2-206ENST00000473916 TCEA2Q15560 299 aa17.44■□□□□ 0.38
VARS2-206ENST00000473916 TMPRSS11BQ86T26 416 aa17.44■□□□□ 0.38
VARS2-206ENST00000473916 PLCD3Q8N3E9 789 aa17.44■□□□□ 0.38
VARS2-206ENST00000473916 PCYOX1LQ8NBM8 494 aa17.44■□□□□ 0.38
VARS2-206ENST00000473916 TFGQ92734 400 aaPredicted RBP17.44■□□□□ 0.38
VARS2-206ENST00000473916 ROPN1LQ96C74 230 aa17.44■□□□□ 0.38
VARS2-206ENST00000473916 GAS2L1Q99501 681 aaPredicted RBP17.44■□□□□ 0.38
VARS2-206ENST00000473916 OSGEPL1Q9H4B0 414 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms