RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 PDE10AQ9Y233 779 aa14.75□□□□□ -0.05
SDC3-203ENST00000471567 A0A1W2PPV9 198 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 KRT87PA6NCN2 255 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 SLC16A8O95907 504 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 SYF2O95926 243 aaKnown RBP14.74□□□□□ -0.05
SDC3-203ENST00000471567 ENO2P09104 434 aaPredicted RBP14.74□□□□□ -0.05
SDC3-203ENST00000471567 HIST1H2AGP0C0S8 130 aaPredicted RBP14.74□□□□□ -0.05
SDC3-203ENST00000471567 PVRP15151 417 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 STMN1P16949 149 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 HIST1H2ADP20671 130 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 PGGT1BP53609 377 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 PNLIPRP1P54315 467 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 KCNAB1Q14722 419 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 SF1Q15637 639 aaKnown RBP14.74□□□□□ -0.05
SDC3-203ENST00000471567 TEX35Q5T0J7 233 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 TRMT10CQ7L0Y3 403 aaKnown RBP14.74□□□□□ -0.05
SDC3-203ENST00000471567 TRIM73Q86UV7 250 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 TAX1BP1Q86VP1 789 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 ZFAND4Q86XD8 727 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 DTX1Q86Y01 620 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 CEP97Q8IW35 865 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 ZNF480Q8WV37 535 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 ZNF501Q96CX3 271 aaPredicted RBP14.74□□□□□ -0.05
SDC3-203ENST00000471567 HIST1H2AHQ96KK5 128 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 DCBLD2Q96PD2 775 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 HIST1H2AJQ99878 128 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 H2AFJQ9BTM1 129 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 TRIM54Q9BYV2 358 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 FANCEQ9HB96 536 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 GPAMQ9HCL2 828 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.74□□□□□ -0.05
SDC3-203ENST00000471567 ADAMTS6Q9UKP5 1117 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 NOVA2Q9UNW9 492 aaKnown RBP14.74□□□□□ -0.05
SDC3-203ENST00000471567 SSUH2Q9Y2M2 353 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 TMEM184BQ9Y519 407 aaPredicted RBP14.74□□□□□ -0.05
SDC3-203ENST00000471567 KLK4Q9Y5K2 254 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 AHCTF1Q8WYP5 2266 aa14.74□□□□□ -0.05
SDC3-203ENST00000471567 FREM2Q5SZK8 3169 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 ANKRD11Q6UB99 2663 aaPredicted RBP14.73□□□□□ -0.05
SDC3-203ENST00000471567 EPG5Q9HCE0 2579 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 TARM1B6A8C7 271 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 E7ENX8 843 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 FAM155BO75949 473 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 WISP3O95389 354 aaPredicted RBP14.73□□□□□ -0.05
SDC3-203ENST00000471567 ACSL3O95573 720 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 DEKP35659 375 aaKnown RBP14.73□□□□□ -0.05
SDC3-203ENST00000471567 AP1S2P56377 157 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 TAP2Q03519 686 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 CLN3Q13286 438 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 MAP7Q14244 749 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 FASTKQ14296 549 aaKnown RBP14.73□□□□□ -0.05
SDC3-203ENST00000471567 NAA25Q14CX7 972 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 EFTUD2Q15029 972 aaKnown RBP eCLIP14.73□□□□□ -0.05
SDC3-203ENST00000471567 GPR19Q15760 415 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 ZKSCAN8Q15776 578 aaPredicted RBP14.73□□□□□ -0.05
SDC3-203ENST00000471567 SPACA3Q8IXA5 215 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 SYTL1Q8IYJ3 562 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 OR2A1Q8NGT9 310 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.73□□□□□ -0.052e-7■■■■■ 64.2
SDC3-203ENST00000471567 ZUFSPQ96AP4 578 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 NAF1Q96HR8 494 aaKnown RBP14.73□□□□□ -0.05
SDC3-203ENST00000471567 KLHL25Q9H0H3 589 aa14.73□□□□□ -0.05
SDC3-203ENST00000471567 ASPMQ8IZT6 3477 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 USP24Q9UPU5 2620 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 A0A087WUV0 522 aaPredicted RBP14.72□□□□□ -0.05
SDC3-203ENST00000471567 PABPN1LA6NDY0 278 aaKnown RBP14.72□□□□□ -0.05
SDC3-203ENST00000471567 KLK10O43240 276 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 STK17BO94768 372 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 DLGAP3O95886 979 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 ABHD2P08910 425 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 MAGP20916 626 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 TNFRSF8P28908 595 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 IMPA1P29218 277 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 CMPK1P30085 196 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 RPA3P35244 121 aaPredicted RBP14.72□□□□□ -0.05
SDC3-203ENST00000471567 ATP1A2P50993 1020 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 RAB10P61026 200 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 ZNF460Q14592 562 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 ZIC1Q15915 447 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 PHKG1Q16816 387 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 UBAP2Q5T6F2 1119 aaKnown RBP14.72□□□□□ -0.05
SDC3-203ENST00000471567 FIGLAQ6QHK4 219 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 CDHR3Q6ZTQ4 885 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 CCDC91Q7Z6B0 441 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 LRRC56Q8IYG6 542 aaPredicted RBP14.72□□□□□ -0.05
SDC3-203ENST00000471567 DNAJC22Q8N4W6 341 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 OR2L3Q8NG85 312 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 ANKRD49Q8WVL7 239 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 ULBP3Q9BZM4 244 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 DERL2Q9GZP9 239 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 CAB39LQ9H9S4 337 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 FAM60AQ9NP50 221 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 STOX2Q9P2F5 926 aaPredicted RBP14.72□□□□□ -0.05
SDC3-203ENST00000471567 SERTAD3Q9UJW9 196 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 PILRAQ9UKJ1 303 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 ADAMTS20P59510 1910 aa14.72□□□□□ -0.05
SDC3-203ENST00000471567 RAD1O60671 282 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 CCNDBP1O95273 360 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 SLU7O95391 586 aaKnown RBP14.71□□□□□ -0.05
SDC3-203ENST00000471567 MT-ND3P03897 115 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms