RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ROR2Q01974 943 aaKnown RBP6.27□□□□□ -1.41
SMC5-202ENST00000471372 DMPKQ09013 629 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 ZNF155Q12901 538 aaPredicted RBP6.27□□□□□ -1.41
SMC5-202ENST00000471372 GAGE1Q13065 139 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 GAGE4Q13068 117 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 MAPK11Q15759 364 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 TMEM35AQ53FP2 167 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 PHLDA2Q53GA4 152 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 XKR9Q5GH70 373 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 FAM46CQ5VWP2 391 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 KCTD11Q693B1 232 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 FAM166AQ6J272 317 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 C11orf63Q6NUN7 778 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 MFSD7Q6UXD7 560 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 MIER3Q7Z3K6 550 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 KLHDC8AQ8IYD2 350 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 RNF113BQ8IZP6 322 aaKnown RBP6.27□□□□□ -1.41
SMC5-202ENST00000471372 NANOGP1Q8N7R0 232 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 L3MBTL4Q8NA19 623 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 KIAA1524Q8TCG1 905 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 TMEM255BQ8WV15 326 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 TANKQ92844 425 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 P2RX5Q93086 422 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 CDKN2AIPNLQ96HQ2 116 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 C16orf45Q96MC5 204 aaPredicted RBP6.27□□□□□ -1.41
SMC5-202ENST00000471372 MYADMQ96S97 322 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 PRRG4Q9BZD6 226 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 ACPTQ9BZG2 426 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 TM6SF1Q9BZW5 370 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 TRPC7Q9HCX4 862 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 GKN1Q9NS71 199 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 TAS2R3Q9NYW6 316 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 SPASTQ9UBP0 616 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 TRMT6Q9UJA5 497 aaKnown RBP6.27□□□□□ -1.41
SMC5-202ENST00000471372 KCNS2Q9ULS6 477 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 TAF1P21675 1872 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 TRAV24A0A0B4J272 114 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 C15orf62A8K5M9 175 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 PRSS46E5RG02 174 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 CACNB4O00305 520 aaPredicted RBP6.26□□□□□ -1.41
SMC5-202ENST00000471372 BUD23O43709 281 aaKnown RBP6.26□□□□□ -1.41
SMC5-202ENST00000471372 WDR1O75083 606 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 LIPFP07098 398 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 H1F0P07305 194 aaKnown RBP6.26□□□□□ -1.41
SMC5-202ENST00000471372 STAG3L1P0CL83 205 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 RPA1P27694 616 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 PIK3R1P27986 724 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 OR3A1P47881 315 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 ZNF234Q14588 700 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 ELFN2Q5R3F8 820 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 NDUFAF5Q5TEU4 345 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 LRRC38Q5VT99 294 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 ZNF704Q6ZNC4 412 aaPredicted RBP6.26□□□□□ -1.41
SMC5-202ENST00000471372 TECPR1Q7Z6L1 1165 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 MEX3DQ86XN8 651 aaKnown RBP6.26□□□□□ -1.41
SMC5-202ENST00000471372 RASGEF1AQ8N9B8 481 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 FAM46BQ96A09 425 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 EEF2KMTQ96G04 330 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 FAM71F1Q96KD3 344 aaPredicted RBP6.26□□□□□ -1.41
SMC5-202ENST00000471372 ARRDC1-AS1Q9H2J1 176 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 TMEM30AQ9NV96 361 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 C11orf21Q9P2W6 132 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 MAD2L2Q9UI95 211 aa6.26□□□□□ -1.41
SMC5-202ENST00000471372 ZCWPW2A0A1B0GU75 182 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 ILVBLA1L0T0 632 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 LILRA5A6NI73 299 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 OR6C75A6NL08 312 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 K7EPI3 171 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 SMPD2O60906 423 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 LDB3O75112 727 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 RPS6KA5O75582 802 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 FAM106CPP0CH98 169 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 GHRP10912 638 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 HSPA8P11142 646 aaKnown RBP6.25□□□□□ -1.41
SMC5-202ENST00000471372 IRF2P14316 349 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 ETS1P14921 441 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 CSF2RAP15509 400 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 FERP16591 822 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 ITGA2P17301 1181 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 CYP2A7P20853 494 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 IER3P46695 156 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 KLHL30Q0D2K2 578 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 ILF2Q12905 390 aaKnown RBP6.25□□□□□ -1.41
SMC5-202ENST00000471372 TRAF3Q13114 568 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 NONOQ15233 471 aaKnown RBP eCLIP6.25□□□□□ -1.41
SMC5-202ENST00000471372 UGT3A2Q3SY77 523 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 ZNF626Q68DY1 528 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 LINGO4Q6UY18 593 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 EXOC3L1Q86VI1 746 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 ANKRD46Q86W74 232 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 AMIGO1Q86WK6 493 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 RYBPQ8N488 228 aaPredicted RBP6.25□□□□□ -1.41
SMC5-202ENST00000471372 PRR26Q8N8Z3 221 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 SMRP1Q8NCR6 262 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 PYCR2Q96C36 320 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 MTBPQ96DY7 904 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 DTD2Q96FN9 168 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 SCMH1Q96GD3 660 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 GSN-AS1Q9NRJ2 163 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 PHPT1Q9NRX4 125 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms