RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 CDK9P50750 372 aaKnown RBP7.8□□□□□ -1.16
SMC4-212ENST00000470240 CCR3P51677 355 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 ARHGDIAP52565 204 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 PNLIPRP1P54315 467 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 NUP107P57740 925 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 MTPNP58546 118 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 TOP3AQ13472 1001 aaPredicted RBP7.8□□□□□ -1.16
SMC4-212ENST00000470240 BIRC2Q13490 618 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 KCNC3Q14003 757 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 ABRAXAS2Q15018 415 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 FXNQ16595 210 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 TCTN1Q2MV58 587 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 ZNF284Q2VY69 593 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 RFX4Q33E94 735 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 FAM174BQ3ZCQ3 159 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 SLC36A3Q495N2 470 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 TRIM60Q495X7 471 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 SYTL3Q4VX76 610 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 SGO1Q5FBB7 561 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 CCNYL2Q5T2Q4 361 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 TTC23Q5W5X9 447 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 ATG9BQ674R7 924 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 LRRC66Q68CR7 880 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 ELMSAN1Q6PJG2 1045 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 CRTC1Q6UUV9 634 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 NEK10Q6ZWH5 1172 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 TMEM150AQ86TG1 271 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 ZDHHC13Q8IUH4 622 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 ERI1Q8IV48 349 aaKnown RBP7.8□□□□□ -1.16
SMC4-212ENST00000470240 ADHFE1Q8IWW8 467 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 BBS7Q8IWZ6 715 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 KIAA2013Q8IYS2 634 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 MICU2Q8IYU8 434 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 EID3Q8N140 333 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 ZFP28Q8NHY6 868 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 MAGEE2Q8TD90 523 aaPredicted RBP7.8□□□□□ -1.16
SMC4-212ENST00000470240 FIG4Q92562 907 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 WBP2Q969T9 261 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 FAM120BQ96EK7 910 aaKnown RBP7.8□□□□□ -1.16
SMC4-212ENST00000470240 SLC47A1Q96FL8 570 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 CMTM7Q96FZ5 175 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 MAGED4Q96JG8 741 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 FOPNLQ96NB1 174 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 TMEM74Q96NL1 305 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 SMIM14Q96QK8 99 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 OR52E6Q96RD3 313 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 SLC29A1Q99808 456 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 BOCQ9BWV1 1114 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 SAP130Q9H0E3 1048 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 RNF208Q9H0X6 261 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 MAGIXQ9H6Y5 334 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 GORASP2Q9H8Y8 452 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 ZFP14Q9HCL3 533 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 PAK6Q9NQU5 681 aaPredicted RBP7.8□□□□□ -1.16
SMC4-212ENST00000470240 DNAJC11Q9NVH1 559 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 INTS7Q9NVH2 962 aaKnown RBP7.8□□□□□ -1.16
SMC4-212ENST00000470240 SMOXQ9NWM0 555 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 DNAJB12Q9NXW2 375 aaKnown RBP7.8□□□□□ -1.16
SMC4-212ENST00000470240 SAGE1Q9NXZ1 904 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 ZNF225Q9UK10 706 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 BAG5Q9UL15 447 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 SLC6A14Q9UN76 642 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 INVSQ9Y283 1065 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 RNF11Q9Y3C5 154 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 PPIL1Q9Y3C6 166 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 COL4A6Q14031 1691 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 A0A096LPI6 279 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 ASPDHA6ND91 283 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 NPIPB15A6NHN6 443 aaPredicted RBP7.79□□□□□ -1.16
SMC4-212ENST00000470240 AGAP14A8MT82 685 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 PDLIM1O00151 329 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 GAPDHSO14556 408 aaPredicted RBP7.79□□□□□ -1.16
SMC4-212ENST00000470240 SLC9A3R1O14745 358 aaPredicted RBP7.79□□□□□ -1.16
SMC4-212ENST00000470240 MSTNO14793 375 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 SCAMP3O14828 347 aaKnown RBP7.79□□□□□ -1.16
SMC4-212ENST00000470240 TAPBPO15533 448 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 GPR39O43194 453 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 SMAD6O43541 496 aaKnown RBP7.79□□□□□ -1.16
SMC4-212ENST00000470240 NUAK1O60285 661 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 UGDHO60701 494 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 E2F6O75461 281 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 TRMUO75648 421 aaKnown RBP7.79□□□□□ -1.16
SMC4-212ENST00000470240 CATP04040 527 aaKnown RBP7.79□□□□□ -1.16
SMC4-212ENST00000470240 ASLP04424 464 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 C8AP07357 584 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 RETP07949 1114 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 CLTBP09497 229 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 CTSAP10619 480 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 THRBP10828 461 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 PABPC1P11940 636 aaKnown RBP7.79□□□□□ -1.16
SMC4-212ENST00000470240 SRCP12931 536 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 ATP1B2P14415 290 aaPredicted RBP7.79□□□□□ -1.16
SMC4-212ENST00000470240 CDH2P19022 906 aaPredicted RBP7.79□□□□□ -1.16
SMC4-212ENST00000470240 UGT1A6P19224 532 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 UGT1A1P22309 533 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 UGT1A4P22310 534 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 EEF1B2P24534 225 aaKnown RBP7.79□□□□□ -1.16
SMC4-212ENST00000470240 IL12AP29459 219 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 VIPR1P32241 457 aa7.79□□□□□ -1.16
SMC4-212ENST00000470240 CD70P32970 193 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms