RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 PRKG2Q13237 762 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 LRRC32Q14392 662 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 CAPN13Q6MZZ7 669 aaPredicted RBP17.59■□□□□ 0.41
SMC4-211ENST00000469858 C16orf89Q6UX73 402 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 RGL4Q8IZJ4 473 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 RAD51AP1Q96B01 352 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 IL17FQ96PD4 163 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 MRPL1Q9BYD6 325 aaKnown RBP17.59■□□□□ 0.41
SMC4-211ENST00000469858 ACSL5Q9ULC5 683 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 FBP2O00757 339 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 UGDHO60701 494 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 WFS1O76024 890 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 SLC2A4P14672 509 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 JUPP14923 745 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 CD22P20273 847 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 RAP1GDS1P52306 607 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 PNLIPRP1P54315 467 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 KIAA1024LP59773 190 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 EMX2Q04743 252 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 RIPK1Q13546 671 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 DOC2AQ14183 400 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 RFTN2Q52LD8 501 aaPredicted RBP17.59■□□□□ 0.41
SMC4-211ENST00000469858 LIPJQ5W064 366 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 REP15Q6BDI9 236 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 DUS1LQ6P1R4 473 aaKnown RBP17.59■□□□□ 0.41
SMC4-211ENST00000469858 HOMEZQ8IX15 550 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 OR5K2Q8NHB8 316 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 MAGEB10Q96LZ2 347 aaPredicted RBP17.59■□□□□ 0.41
SMC4-211ENST00000469858 HHIPQ96QV1 700 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 BRINP2Q9C0B6 783 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 FBXL21Q9UKT6 434 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 WDR37Q9Y2I8 494 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 POLR3HQ9Y535 204 aaPredicted RBP17.59■□□□□ 0.41
SMC4-211ENST00000469858 PRSS38A1L453 326 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 KRBA1A5PL33 1030 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 CHURC1-FNTBB4DL54 471 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 E7ENX8 843 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 RPN2P04844 631 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 KELP23276 732 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 IRX1P78414 480 aaPredicted RBP17.58■□□□□ 0.4
SMC4-211ENST00000469858 TAP2Q03519 686 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 GAS6Q14393 721 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 PUS10Q3MIT2 529 aaKnown RBP17.58■□□□□ 0.4
SMC4-211ENST00000469858 SUSD1Q6UWL2 747 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 ENPP7Q6UWV6 458 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 SYNPOQ8N3V7 929 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 TSTD1Q8NFU3 115 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 BMFQ96LC9 184 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 ACPTQ9BZG2 426 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 C6orf106Q9H6K1 298 aaPredicted RBP17.58■□□□□ 0.4
SMC4-211ENST00000469858 CARS2Q9HA77 564 aaKnown RBP17.58■□□□□ 0.4
SMC4-211ENST00000469858 NOP53Q9NZM5 478 aaKnown RBP17.58■□□□□ 0.4
SMC4-211ENST00000469858 SLC7A8Q9UHI5 535 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 KCNE2Q9Y6J6 123 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 PCM1Q15154 2024 aa17.58■□□□□ 0.4
SMC4-211ENST00000469858 NRP2O60462 931 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 PDE5AO76074 875 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 GNAZP19086 355 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 UFM1P61960 85 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 NFATC4Q14934 902 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 KPNB1Q14974 876 aaKnown RBP17.57■□□□□ 0.4
SMC4-211ENST00000469858 PDCD4Q53EL6 469 aaKnown RBP17.57■□□□□ 0.4
SMC4-211ENST00000469858 HABP4Q5JVS0 413 aaKnown RBP17.57■□□□□ 0.4
SMC4-211ENST00000469858 IL23RQ5VWK5 629 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 FRG2Q64ET8 278 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 TMPRSS11BQ86T26 416 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 PACS2Q86VP3 889 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 EFCAB3Q8N7B9 438 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 WDR60Q8WVS4 1066 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 NEIL2Q969S2 332 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 PDXPQ96GD0 296 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 TOE1Q96GM8 510 aaKnown RBP17.57■□□□□ 0.4
SMC4-211ENST00000469858 TEX37Q96LM6 180 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 C12orf66Q96MD2 445 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 FRG2BQ96QU4 278 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 SGPP1Q9BX95 441 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 FOXQ1Q9C009 403 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 TRIT1Q9H3H1 467 aaKnown RBP17.57■□□□□ 0.4
SMC4-211ENST00000469858 WDR41Q9HAD4 459 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 EBF2Q9HAK2 575 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 LRTM1Q9HBL6 345 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 LTB4R2Q9NPC1 389 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 CCDC177Q9NQR7 707 aaPredicted RBP17.57■□□□□ 0.4
SMC4-211ENST00000469858 PRDM6Q9NQX0 595 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 MRPS17Q9Y2R5 130 aaKnown RBP17.57■□□□□ 0.4
SMC4-211ENST00000469858 CFLARO15519 480 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 ENTPD5O75356 428 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 SEC22BO75396 215 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 CIB2O75838 187 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 IGLV3-19P01714 112 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 HOXC4P09017 264 aaPredicted RBP17.57■□□□□ 0.4
SMC4-211ENST00000469858 G6PDP11413 515 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 AKT2P31751 481 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 MRPL19P49406 292 aaKnown RBP17.57■□□□□ 0.4
SMC4-211ENST00000469858 WASHC2DQ5SRD0 308 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 TPRG1LQ5T0D9 272 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 CAPRIN2Q6IMN6 1127 aaKnown RBP17.57■□□□□ 0.4
SMC4-211ENST00000469858 GCNT7Q6ZNI0 430 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 LRRC56Q8IYG6 542 aaPredicted RBP17.57■□□□□ 0.4
SMC4-211ENST00000469858 PGAM4Q8N0Y7 254 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms