RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 LRTM1Q9HBL6 345 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 CCDC177Q9NQR7 707 aaPredicted RBP9.08□□□□□ -0.96
SMC1A-205ENST00000469129 SUCOQ9UBS9 1254 aaKnown RBP9.08□□□□□ -0.96
SMC1A-205ENST00000469129 ACSL5Q9ULC5 683 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 ZFR2Q9UPR6 939 aaKnown RBP9.08□□□□□ -0.96
SMC1A-205ENST00000469129 MAPRE3Q9UPY8 281 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 POMPQ9Y244 141 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 SLC22A14Q9Y267 594 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 KCNE2Q9Y6J6 123 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 FANCMQ8IYD8 2048 aa9.08□□□□□ -0.96
SMC1A-205ENST00000469129 CROCCQ5TZA2 2017 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 A0A0C4DFX4 3053 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 TP53BP1Q12888 1972 aaPredicted RBP9.07□□□□□ -0.96
SMC1A-205ENST00000469129 TBC1D3DA0A087WVF3 549 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 TBC1D3IA0A087WXS9 549 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 TBC1D3EA0A087X179 549 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 TBC1D3KA0A087X1G2 549 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 A0A1W2PP18 115 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 TBC1D3FA6NER0 549 aaPredicted RBP9.07□□□□□ -0.96
SMC1A-205ENST00000469129 LRRC72A6NJI9 287 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 TBC1D3LB9A6J9 549 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 H0Y3Z8 333 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 DLL1O00548 723 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 MAN2B1O00754 1011 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 FBP2O00757 339 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 SEC22BO75396 215 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 SLC16A8O95907 504 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 PDYNP01213 254 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 HOXC4P09017 264 aaPredicted RBP9.07□□□□□ -0.96
SMC1A-205ENST00000469129 TBC1D3HP0C7X1 549 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 PRPS2P11908 318 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 SLC2A4P14672 509 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 EPORP19235 508 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 CAPN3P20807 821 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 ACADLP28330 430 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 PDHA2P29803 388 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 IGFALSP35858 605 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 DIO3P55073 304 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 LAPTM5Q13571 262 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 FLOT2Q14254 428 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 NFE2L1Q14494 772 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 INPP5AQ14642 412 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 ARHGAP19Q14CB8 494 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 IL23RQ5VWK5 629 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 TBC1D3GQ6DHY5 549 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 TBC1D3CQ6IPX1 549 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 CYP20A1Q6UW02 462 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 KIAA1324Q6UXG2 1013 aaKnown RBP9.07□□□□□ -0.96
SMC1A-205ENST00000469129 HPS6Q86YV9 775 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 FUNDC1Q8IVP5 155 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 RGL4Q8IZJ4 473 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 TBC1D3Q8IZP1 549 aaPredicted RBP9.07□□□□□ -0.96
SMC1A-205ENST00000469129 LILRA3Q8N6C8 439 aaPredicted RBP9.07□□□□□ -0.96
SMC1A-205ENST00000469129 RPLP0P6Q8NHW5 317 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 STARD8Q92502 1023 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 FAM3CQ92520 227 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 UBE2E3Q969T4 207 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 PYCR2Q96C36 320 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 CDRT15Q96T59 188 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 HAUS8Q9BT25 410 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 EFCAB11Q9BUY7 163 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 COL25A1Q9BXS0 654 aaPredicted RBP9.07□□□□□ -0.96
SMC1A-205ENST00000469129 TRIM15Q9C019 465 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 TRIT1Q9H3H1 467 aaKnown RBP9.07□□□□□ -0.96
SMC1A-205ENST00000469129 MUC13Q9H3R2 512 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 EHD1Q9H4M9 534 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 BRF2Q9HAW0 419 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 SGK2Q9HBY8 427 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 POLMQ9NP87 494 aaPredicted RBP9.07□□□□□ -0.96
SMC1A-205ENST00000469129 SLC2A4RGQ9NR83 387 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 NMRK1Q9NWW6 199 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 ADA2Q9NZK5 511 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 STX18Q9P2W9 335 aaKnown RBP9.07□□□□□ -0.96
SMC1A-205ENST00000469129 GULP1Q9UBP9 304 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 ASF1AQ9Y294 204 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 TMEM98Q9Y2Y6 226 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 CCL27Q9Y4X3 112 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 PCDHGA7Q9Y5G6 932 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 PCDHGA11Q9Y5H2 935 aa9.07□□□□□ -0.96
SMC1A-205ENST00000469129 MYO10Q9HD67 2058 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 TCRBV21S2A2A0A5A6 115 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 KANSL1LA0AUZ9 987 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 PRR23AA6NEV1 266 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 ANTXRLA6NF34 631 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 E7EQ34 232 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 H0YIV9 168 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 TOR1BO14657 336 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 FPGTO14772 594 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 PI15O43692 258 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 DNAJA2O60884 412 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 KRT36O76013 467 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 MYO1DO94832 1006 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 SRFP11831 508 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 VARSP26640 1264 aaKnown RBP9.06□□□□□ -0.96
SMC1A-205ENST00000469129 CASP2P42575 452 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 THOP1P52888 689 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 NME5P56597 212 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 SLC34A1Q06495 639 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 TRAP1Q12931 704 aaKnown RBP9.06□□□□□ -0.96
SMC1A-205ENST00000469129 BNIP2Q12982 314 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms