RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 RUVBL1Q9Y265 456 aaKnown RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 MRPS17Q9Y2R5 130 aaKnown RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 WBP11Q9Y2W2 641 aaKnown RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 TMEM202A6NGA9 273 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 A8MUI8 341 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 C2CD4DB7Z1M9 353 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 FOXE1O00358 373 aaPredicted RBP9.89□□□□□ -0.83
MSH5-213ENST00000468136 FBP2O00757 339 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 TNFRSF10CO14798 259 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 ADAM23O75077 832 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 SEC22BO75396 215 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 APBB3O95704 486 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 SLC16A8O95907 504 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 IGLV3-19P01714 112 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 SLC35G4P0C7Q5 338 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 ERGP11308 486 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 SRFP11831 508 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 HSD17B1P14061 328 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 EPORP19235 508 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 IGFBP4P22692 258 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 VARSP26640 1264 aaKnown RBP9.89□□□□□ -0.83
MSH5-213ENST00000468136 GSTM2P28161 218 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 HTR1BP28222 390 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 OXTRP30559 389 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 RPL3P39023 403 aaKnown RBP9.89□□□□□ -0.83
MSH5-213ENST00000468136 VHLP40337 213 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 WASP42768 502 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 ASMTP46597 345 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 PREPP48147 710 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 HTR6P50406 440 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 DIO3P55073 304 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 CLDN8P56748 225 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 EEFSECP57772 596 aaKnown RBP9.89□□□□□ -0.83
MSH5-213ENST00000468136 C21orf58P58505 322 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 YPEL5P62699 121 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 FLOT2Q14254 428 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 LRRC32Q14392 662 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 INPP5AQ14642 412 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 RCN1Q15293 331 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 CPSF6Q16630 551 aaKnown RBP eCLIP9.89□□□□□ -0.83
MSH5-213ENST00000468136 CYP2A13Q16696 494 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 AASDHQ4L235 1098 aaPredicted RBP9.89□□□□□ -0.83
MSH5-213ENST00000468136 SPIN4Q56A73 249 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 CMPK2Q5EBM0 449 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 XKR6Q5GH73 641 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 ZNF648Q5T619 568 aaPredicted RBP9.89□□□□□ -0.83
MSH5-213ENST00000468136 ATG9BQ674R7 924 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 MED27Q6P2C8 311 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 CHRDL2Q6WN34 429 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 SPNS2Q8IVW8 549 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 SYTL1Q8IYJ3 562 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 RGL4Q8IZJ4 473 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 KRT78Q8N1N4 520 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 TNIP2Q8NFZ5 429 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 OR5K2Q8NHB8 316 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 PROKR1Q8TCW9 393 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 WDR60Q8WVS4 1066 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 FAM3CQ92520 227 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 TFGQ92734 400 aaPredicted RBP9.89□□□□□ -0.83
MSH5-213ENST00000468136 EZH1Q92800 747 aaPredicted RBP9.89□□□□□ -0.83
MSH5-213ENST00000468136 FOXJ1Q92949 421 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 ZUFSPQ96AP4 578 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 LRRC58Q96CX6 371 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 NPAS2Q99743 824 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 EFHD1Q9BUP0 239 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 ZDHHC5Q9C0B5 715 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 MKRN2Q9H000 416 aaKnown RBP9.89□□□□□ -0.83
MSH5-213ENST00000468136 MVB12BQ9H7P6 319 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 UBE2ZQ9H832 354 aaPredicted RBP9.89□□□□□ -0.83
MSH5-213ENST00000468136 NT5DC2Q9H857 520 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 RMND5AQ9H871 391 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 CD248Q9HCU0 757 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 S100A14Q9HCY8 104 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 CCDC177Q9NQR7 707 aaPredicted RBP9.89□□□□□ -0.83
MSH5-213ENST00000468136 ADA2Q9NZK5 511 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 C6orf203Q9P0P8 240 aaPredicted RBP9.89□□□□□ -0.83
MSH5-213ENST00000468136 GULP1Q9UBP9 304 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 ZFR2Q9UPR6 939 aaKnown RBP9.89□□□□□ -0.83
MSH5-213ENST00000468136 ASF1AQ9Y294 204 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 PCDHGA7Q9Y5G6 932 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 HS3ST3A1Q9Y663 406 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 TRPM6Q9BX84 2022 aa9.89□□□□□ -0.83
MSH5-213ENST00000468136 TBC1D3DA0A087WVF3 549 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 TBC1D3IA0A087WXS9 549 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 TBC1D3EA0A087X179 549 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 TBC1D3KA0A087X1G2 549 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 TBC1D3FA6NER0 549 aaPredicted RBP9.88□□□□□ -0.83
MSH5-213ENST00000468136 CHURC1-FNTBB4DL54 471 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 TBC1D3LB9A6J9 549 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 PLK4O00444 970 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 FPGTO14772 594 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 PAK4O96013 591 aaPredicted RBP9.88□□□□□ -0.83
MSH5-213ENST00000468136 PDYNP01213 254 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 TBC1D3HP0C7X1 549 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 C1GALT1C1LP0DN25 315 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 G6PDP11413 515 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 PRPS1L1P21108 318 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 IDSP22304 550 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 HRH2P25021 359 aa9.88□□□□□ -0.83
MSH5-213ENST00000468136 PDHA2P29803 388 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms