RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SZT2Q5T011 3432 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 LAMB2P55268 1798 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 HTTP42858 3142 aa3.17□□□□□ -1.9
XRN1-206ENST00000467077 MRC1P22897 1456 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 LAMB4A4D0S4 1761 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 LIPT2A6NK58 231 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 SCAMP1O15126 338 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 SMAD9O15198 467 aaKnown RBP3.16□□□□□ -1.9
XRN1-206ENST00000467077 PLPP2O43688 288 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 CLPTM1O96005 669 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 TFAP2AP05549 437 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 FAM157CP0CG43 387 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 CDH2P19022 906 aaPredicted RBP3.16□□□□□ -1.9
XRN1-206ENST00000467077 HRH2P25021 359 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 NFKBIAP25963 317 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 ACADLP28330 430 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 RXRGP48443 463 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 GALCP54803 685 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 HUNKP57058 714 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 MS4A2Q01362 244 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 MVPQ14764 893 aaKnown RBP3.16□□□□□ -1.9
XRN1-206ENST00000467077 MAPRE1Q15691 268 aaKnown RBP3.16□□□□□ -1.9
XRN1-206ENST00000467077 ACSM2BQ68CK6 577 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 PACS1Q6VY07 963 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 MFSD6Q6ZSS7 791 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 ANO5Q75V66 913 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 PXKQ7Z7A4 578 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 C1orf52Q8N6N3 182 aaKnown RBP3.16□□□□□ -1.9
XRN1-206ENST00000467077 TRPC4APQ8TEL6 797 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 UCMAQ8WVF2 138 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 SLX1AQ9BQ83 275 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 OLA1Q9NTK5 396 aaKnown RBP3.16□□□□□ -1.9
XRN1-206ENST00000467077 RNF186Q9NXI6 227 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 B3GALT5Q9Y2C3 310 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 PDE4DIPQ5VU43 2346 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 UNC80Q8N2C7 3258 aa3.16□□□□□ -1.9
XRN1-206ENST00000467077 DDX60Q8IY21 1712 aaKnown RBP3.16□□□□□ -1.9
XRN1-206ENST00000467077 ANKRD36CQ5JPF3 1778 aa3.15□□□□□ -1.9
XRN1-206ENST00000467077 A0A087X0M5 115 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 A0A1B0GX30 115 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 OGG1O15527 345 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 MOCS3O95396 460 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 EML2O95834 649 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 HIST1H2ABP04908 130 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 GNAZP19086 355 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 ANXA7P20073 488 aaKnown RBP3.15□□□□□ -1.91
XRN1-206ENST00000467077 MSH3P20585 1137 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 HIST1H2ADP20671 130 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 CAPN3P20807 821 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 MAN1A1P33908 653 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 CD81P60033 236 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 DLK1P80370 383 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 PKN2Q16513 984 aaKnown RBP3.15□□□□□ -1.91
XRN1-206ENST00000467077 PCGF3Q3KNV8 242 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 HIST3H2AQ7L7L0 130 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 HJURPQ8NCD3 748 aaPredicted RBP3.15□□□□□ -1.91
XRN1-206ENST00000467077 GFI1Q99684 422 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 SYT15Q9BQS2 421 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 GPATCH1Q9BRR8 931 aaKnown RBP3.15□□□□□ -1.91
XRN1-206ENST00000467077 TEX13AQ9BXU3 409 aaPredicted RBP3.15□□□□□ -1.91
XRN1-206ENST00000467077 TMX4Q9H1E5 349 aaPredicted RBP3.15□□□□□ -1.91
XRN1-206ENST00000467077 MUC13Q9H3R2 512 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 ZBTB20Q9HC78 741 aaPredicted RBP3.15□□□□□ -1.91
XRN1-206ENST00000467077 DIAPH3Q9NSV4 1193 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 ORC3Q9UBD5 711 aaPredicted RBP3.15□□□□□ -1.91
XRN1-206ENST00000467077 MTMR6Q9Y217 621 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 NIP7Q9Y221 180 aaKnown RBP eCLIP3.15□□□□□ -1.91
XRN1-206ENST00000467077 YIPF1Q9Y548 306 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 EYSQ5T1H1 3165 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 ITIH6Q6UXX5 1313 aa3.15□□□□□ -1.91
XRN1-206ENST00000467077 HEG1Q9ULI3 1381 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 A0A0C4DFX4 3053 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 C15orf62A8K5M9 175 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 ZBTB43O43298 467 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 PPIP5K2O43314 1243 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 SYNCRIPO60506 623 aaKnown RBP3.14□□□□□ -1.91
XRN1-206ENST00000467077 USO1O60763 962 aaKnown RBP3.14□□□□□ -1.91
XRN1-206ENST00000467077 ZNF217O75362 1048 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 ZFAND5O76080 213 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 BAIAP3O94812 1187 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 BMP10O95393 424 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 DDX58O95786 925 aaKnown RBP3.14□□□□□ -1.91
XRN1-206ENST00000467077 LIPFP07098 398 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 KRT19P08727 400 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 HMOX1P09601 288 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 SELLP14151 372 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 TMEM11P17152 192 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 MSH2P43246 934 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 GMPSP49915 693 aaPredicted RBP3.14□□□□□ -1.91
XRN1-206ENST00000467077 GPR143P51810 404 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 TRA2BP62995 288 aaKnown RBP3.14□□□□□ -1.91
XRN1-206ENST00000467077 CXCL9Q07325 125 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 LMOD3Q0VAK6 560 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 TEFQ10587 303 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 GRAPQ13588 217 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 KRT32Q14532 448 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 TNIP1Q15025 636 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 DUOXA1Q1HG43 343 aa3.14□□□□□ -1.91
XRN1-206ENST00000467077 MTHFSDQ2M296 383 aaKnown RBP3.14□□□□□ -1.91
XRN1-206ENST00000467077 ZSCAN23Q3MJ62 389 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms