RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 PCNAP12004 261 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 CHRM3P20309 590 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 CAPN3P20807 821 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 EEFSECP57772 596 aaKnown RBP17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 KCNAB2Q13303 367 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 GRB7Q14451 532 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 FAM26DQ5JW98 314 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 ZNF691Q5VV52 312 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 PAQR3Q6TCH7 311 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 SCIMPQ6UWF3 145 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 ZNF767PQ75MW2 155 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 C16orf59Q7L2K0 433 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 MIER2Q8N344 545 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 OR4K2Q8NGD2 314 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 CCDC126Q96EE4 140 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 RWDD3Q9Y3V2 267 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 MYO16Q9Y6X6 1858 aa17.64■□□□□ 0.41
SNAPC3-205ENST00000467062 LOC110117498-PIK3R3F6TDL0 507 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 ENPP3O14638 875 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 ZNF780AO75290 641 aaPredicted RBP17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 LINC00032P0C843 101 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 MTHFD2P13995 350 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 CD36P16671 472 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 ITGA2P17301 1181 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 PIGAP37287 484 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 SLC11A1P49279 550 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 SLC14A2Q15849 920 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 LINGO4Q6UY18 593 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 RNF180Q86T96 592 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 MICU2Q8IYU8 434 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 GIMAP1Q8WWP7 306 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 RPL3LQ92901 407 aaKnown RBP17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 C19orf60Q96EN9 201 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 C17orf62Q9BQA9 187 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 SEMA4BQ9NPR2 832 aaPredicted RBP17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 MAT2BQ9NZL9 334 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 PCDH10Q9P2E7 1040 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 MAGED1Q9Y5V3 778 aaPredicted RBP17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 PDE4DIPQ5VU43 2346 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 MEN1O00255 615 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 OR1I1O60431 355 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 ANGPTL1O95841 491 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 ATF6P18850 670 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 PRDX3P30048 256 aaKnown RBP17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 IL12RB1P42701 662 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 POU6F2P78424 691 aaPredicted RBP17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 CDK5R2Q13319 367 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 UGT3A2Q3SY77 523 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 PARP15Q460N3 678 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 SDE2Q6IQ49 451 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 TADA1Q96BN2 335 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 CDKN2AIPNLQ96HQ2 116 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 NSMCE2Q96MF7 247 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 RBM4BQ9BQ04 359 aaKnown RBP17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 RBM4Q9BWF3 364 aaKnown RBP17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 CATSPERZQ9NTU4 200 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 MARCH5Q9NX47 278 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 SCN3BQ9NY72 215 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 USE1Q9NZ43 259 aa17.63■□□□□ 0.41
SNAPC3-205ENST00000467062 CBX4O00257 560 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 PIP5K1BO14986 540 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 XPNPEP2O43895 674 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 WISP3O95389 354 aaPredicted RBP17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 SERPINF2P08697 491 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 RAP2AP10114 183 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 IRF1P10914 325 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 ZNF37AP17032 561 aaPredicted RBP17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 FDXRP22570 491 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 MTHFRP42898 656 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 HERVK_113P63132 956 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 FAM98BQ52LJ0 330 aaKnown RBP17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 CES5AQ6NT32 575 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 HID1Q8IV36 788 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 TMEM199Q8N511 208 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 TP53I13Q8NBR0 393 aaPredicted RBP17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 MDGA1Q8NFP4 955 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 SETD6Q8TBK2 473 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 LRRC20Q8TCA0 184 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 TMCO6Q96DC7 493 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 ERVK-6Q9BXR3 956 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 NXF2Q9GZY0 626 aaKnown RBP17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 SMURF2Q9HAU4 748 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 LTB4R2Q9NPC1 389 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 C3orf18Q9UK00 162 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 PEX16Q9Y5Y5 336 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 TYW5A2RUC4 315 aaKnown RBP17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 F5H5T6 163 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 TRIM77I1YAP6 450 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 CDC7O00311 574 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 AP3D1O14617 1153 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 CPNE3O75131 537 aaKnown RBP17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 OR7A10O76100 309 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 FSHRP23945 695 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 HOXD9P28356 352 aaPredicted RBP17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 HTR1EP28566 365 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 SLC15A1P46059 708 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 FAM189BP81408 668 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 SREBF2Q12772 1141 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 NFYCQ13952 458 aa17.62■□□□□ 0.41
SNAPC3-205ENST00000467062 NDUFAF5Q5TEU4 345 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms