RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.26■□□□□ 0.673e-9■■■■□ 23.5
SDF4-205ENST00000465727 A0A1W2PQH9 124 aa19.25■□□□□ 0.67
SDF4-205ENST00000465727 GJB3O75712 270 aa19.25■□□□□ 0.67
SDF4-205ENST00000465727 ESR1P03372 595 aa19.25■□□□□ 0.67
SDF4-205ENST00000465727 RPP38P78345 283 aaKnown RBP19.25■□□□□ 0.67
SDF4-205ENST00000465727 CCDC71Q8IV32 467 aaPredicted RBP19.25■□□□□ 0.67
SDF4-205ENST00000465727 UBQLNLQ8IYU4 475 aa19.25■□□□□ 0.67
SDF4-205ENST00000465727 ENTHD1Q8IYW4 607 aa19.25■□□□□ 0.67
SDF4-205ENST00000465727 ATG16L2Q8NAA4 619 aa19.25■□□□□ 0.67
SDF4-205ENST00000465727 HRASLS5Q96KN8 279 aa19.25■□□□□ 0.67
SDF4-205ENST00000465727 CDK5RAP1Q96SZ6 601 aaKnown RBP19.25■□□□□ 0.67
SDF4-205ENST00000465727 FBXL12Q9NXK8 326 aa19.25■□□□□ 0.67
SDF4-205ENST00000465727 TBC1D14Q9P2M4 693 aa19.25■□□□□ 0.67
SDF4-205ENST00000465727 DKK3Q9UBP4 350 aa19.25■□□□□ 0.67
SDF4-205ENST00000465727 PSORS1C1Q9UIG5 152 aa19.25■□□□□ 0.67
SDF4-205ENST00000465727 LYVE1Q9Y5Y7 322 aa19.25■□□□□ 0.67
SDF4-205ENST00000465727 DPM1O60762 260 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 ZNF682O95780 498 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 SEMG1P04279 462 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 PCSK2P16519 638 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 SOX6P35712 828 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 OLR1P78380 273 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 CREMQ03060 361 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 CHRNEQ04844 493 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 CDK10Q15131 360 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 TOR1AIP1Q5JTV8 583 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 TMC5Q6UXY8 1006 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 SERPINA11Q86U17 422 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 FAM9CQ8IZT9 166 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 CELF2-AS1Q8N7Q2 184 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 DNASE1L2Q92874 299 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 GABARAPL3Q9BY60 117 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 LRTM1Q9HBL6 345 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 SERHLQ9NQF3 203 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 SPO11Q9Y5K1 396 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 GOLGA8CPA6NN73 597 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 MEIS3P2A8K0S8 358 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 NOTOA8MTQ0 251 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 HOXB9P17482 250 aaPredicted RBP19.24■□□□□ 0.67
SDF4-205ENST00000465727 LIMK1P53667 647 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 TSPY1Q01534 308 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 CAMK2GQ13555 558 aaPredicted RBP19.24■□□□□ 0.67
SDF4-205ENST00000465727 MFSD10Q14728 455 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 STARD3Q14849 445 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 LAPTM4AQ15012 233 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 ZFP69Q49AA0 526 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 USP39Q53GS9 565 aaKnown RBP19.24■□□□□ 0.67
SDF4-205ENST00000465727 PRSS36Q5K4E3 855 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 LRRTM3Q86VH5 581 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 MON1AQ86VX9 555 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 KRTCAP2Q8N6L1 136 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 GTF3C2Q8WUA4 911 aaPredicted RBP19.24■□□□□ 0.67
SDF4-205ENST00000465727 TMCO6Q96DC7 493 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 REXO4Q9GZR2 422 aaKnown RBP19.24■□□□□ 0.67
SDF4-205ENST00000465727 TNKS2Q9H2K2 1166 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 SLC6A13Q9NSD5 602 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 SAMHD1Q9Y3Z3 626 aaKnown RBP19.24■□□□□ 0.67
SDF4-205ENST00000465727 ARIH1Q9Y4X5 557 aaPredicted RBP19.24■□□□□ 0.67
SDF4-205ENST00000465727 PCDHGA3Q9Y5H0 932 aa19.24■□□□□ 0.67
SDF4-205ENST00000465727 CASTOR2A6NHX0 329 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 DRGXA6NNA5 263 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 CENPXA8MT69 81 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 ULK1O75385 1050 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 ARHGEF15O94989 841 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 DDOSTP39656 456 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 MAPKAPK2P49137 400 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 UGT2B15P54855 530 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 INO80DQ53TQ3 878 aaPredicted RBP19.23■□□□□ 0.67
SDF4-205ENST00000465727 PSAPL1Q6NUJ1 521 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 CCDC190Q86UF4 302 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 SPATA2LQ8IUW3 424 aaPredicted RBP19.23■□□□□ 0.67
SDF4-205ENST00000465727 OR10T2Q8NGX3 314 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 RAD9AQ99638 391 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 REEP1Q9H902 201 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 ZFP14Q9HCL3 533 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 ZMYM5Q9UJ78 669 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 TRAPPC4Q9Y296 219 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 ANGPTL3Q9Y5C1 460 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 A6NL46 340 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 FFAR2O15552 330 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 ALX3O95076 343 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 MFN2O95140 757 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 GLUD1P00367 558 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 CDK1P06493 297 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 LPOP22079 712 aaPredicted RBP19.23■□□□□ 0.67
SDF4-205ENST00000465727 EPHA2P29317 976 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 PTGER3P43115 390 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 SLC15A1P46059 708 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 ITGA1P56199 1179 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 MRPS15P82914 257 aaKnown RBP19.23■□□□□ 0.67
SDF4-205ENST00000465727 TEKQ02763 1124 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 FBXL22Q6P050 247 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 SBSNQ6UWP8 590 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 PIANPQ8IYJ0 282 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 THEM5Q8N1Q8 247 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 C10orf111Q8N326 155 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 IGSF8Q969P0 613 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 MGME1Q9BQP7 344 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 RNF38Q9H0F5 515 aa19.23■□□□□ 0.67
SDF4-205ENST00000465727 ABHD16BQ9H3Z7 469 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms