RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 NKAPQ8N5F7 415 aaKnown RBP11.95□□□□□ -0.5
CHPF2-202ENST00000465601 MCOLN3Q8TDD5 553 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 ANKRD49Q8WVL7 239 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 RNF31Q96EP0 1072 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 TSPAN17Q96FV3 270 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 PDLIM5Q96HC4 596 aaKnown RBP11.95□□□□□ -0.5
CHPF2-202ENST00000465601 DCBLD2Q96PD2 775 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 SLC12A9Q9BXP2 914 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 PARVBQ9HBI1 364 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.95□□□□□ -0.5
CHPF2-202ENST00000465601 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHPF2-202ENST00000465601 BTRCQ9Y297 605 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 KLHL20Q9Y2M5 609 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 PCDHGA3Q9Y5H0 932 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 V9GYY5 206 aaPredicted RBP11.95□□□□□ -0.5
CHPF2-202ENST00000465601 ZFHX4Q86UP3 3567 aa11.95□□□□□ -0.5
CHPF2-202ENST00000465601 A0A087WUV0 522 aaPredicted RBP11.94□□□□□ -0.5
CHPF2-202ENST00000465601 A0A1W2PPV9 198 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 POC1B-GALNT4F8VUJ3 575 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 CDC7O00311 574 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 WISP3O95389 354 aaPredicted RBP11.94□□□□□ -0.5
CHPF2-202ENST00000465601 ERGP11308 486 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 STMN1P16949 149 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 PSMB5P28074 263 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 GMPRP36959 345 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 HSD17B2P37059 387 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 PNLIPRP1P54315 467 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 PCBP4P57723 403 aaKnown RBP11.94□□□□□ -0.5
CHPF2-202ENST00000465601 RAB10P61026 200 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 ACY1Q03154 408 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 TUBB3Q13509 450 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 BMPR2Q13873 1038 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 ARHGAP19Q14CB8 494 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 GPR19Q15760 415 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 ZIC1Q15915 447 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 PHKG1Q16816 387 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 SLC5A12Q1EHB4 618 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 TMTC4Q5T4D3 741 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 MBOAT1Q6ZNC8 495 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 TRMT10CQ7L0Y3 403 aaKnown RBP11.94□□□□□ -0.5
CHPF2-202ENST00000465601 CMC1Q7Z7K0 106 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 SYTL1Q8IYJ3 562 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 SPATA6LQ8N4H0 392 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 EIF1ADQ8N9N8 165 aaKnown RBP11.94□□□□□ -0.5
CHPF2-202ENST00000465601 PPFIBP2Q8ND30 876 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 SNIP1Q8TAD8 396 aaKnown RBP11.94□□□□□ -0.5
CHPF2-202ENST00000465601 HMGCLL1Q8TB92 370 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 ZNF480Q8WV37 535 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 SMPDL3AQ92484 453 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 SLC22A18Q96BI1 424 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 DDA1Q9BW61 102 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 ACAT2Q9BWD1 397 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 TXLNGYQ9BZA5 131 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 ASPSCR1Q9BZE9 553 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 UNKQ9C0B0 810 aaKnown RBP11.94□□□□□ -0.5
CHPF2-202ENST00000465601 B3GNT4Q9C0J1 378 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 POPDC3Q9HBV1 291 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 FAM60AQ9NP50 221 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 PDE7BQ9NP56 450 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 FGF21Q9NSA1 209 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 ABCF3Q9NUQ8 709 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 PCDHB11Q9Y5F2 797 aa11.94□□□□□ -0.5
CHPF2-202ENST00000465601 CCDC88CQ9P219 2028 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 HMX2A2RU54 273 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 NPEPPSL1A6NEC2 478 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 E7ENX8 843 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 MAP3K7O43318 606 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 RIPK2O43353 540 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 HIST1H2AGP0C0S8 130 aaPredicted RBP11.93□□□□□ -0.5
CHPF2-202ENST00000465601 CCDC166P0CW27 439 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 HIST1H2ADP20671 130 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 MAGP20916 626 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 TNFRSF8P28908 595 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 IMPA1P29218 277 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 RPA3P35244 121 aaPredicted RBP11.93□□□□□ -0.5
CHPF2-202ENST00000465601 EIF2S3P41091 472 aaKnown RBP11.93□□□□□ -0.5
CHPF2-202ENST00000465601 YBX1P67809 324 aaKnown RBP11.93□□□□□ -0.5
CHPF2-202ENST00000465601 TAP2Q03519 686 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 SP140Q13342 867 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 IL11RAQ14626 422 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 ZKSCAN8Q15776 578 aaPredicted RBP11.93□□□□□ -0.5
CHPF2-202ENST00000465601 KIAA1614Q5VZ46 1190 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 FIGLAQ6QHK4 219 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 RAPH1Q70E73 1250 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 C19orf47Q8N9M1 422 aaKnown RBP11.93□□□□□ -0.5
CHPF2-202ENST00000465601 ZNF248Q8NDW4 579 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 OR2A1Q8NGT9 310 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 SLC44A1Q8WWI5 657 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 HIST1H2AHQ96KK5 128 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 CCDC138Q96M89 665 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 TEFMQ96QE5 360 aaKnown RBP11.93□□□□□ -0.5
CHPF2-202ENST00000465601 PAFAH2Q99487 392 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 MIPEPQ99797 713 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 HIST1H2AJQ99878 128 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 ZPBPQ9BS86 351 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 H2AFJQ9BTM1 129 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 TRIM54Q9BYV2 358 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 WDR70Q9NW82 654 aa11.93□□□□□ -0.5
CHPF2-202ENST00000465601 UTP6Q9NYH9 597 aaKnown RBP11.93□□□□□ -0.5
CHPF2-202ENST00000465601 STOX2Q9P2F5 926 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms