RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	HMG20B	Q9P0W2	317 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	MYO6	Q9UM54	1294 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CDC14A	Q9UNH5	594 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	GOLGA4	Q13439	2230 aa	Known RBP	4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	COL4A2	P08572	1712 aa		4.94	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CUBN	O60494	3623 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	IGHV4-28	A0A0C4DH34	117 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	hDV102S1	A0JD36	115 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	DYTN	A2CJ06	578 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	GTPBP10	A4D1E9	387 aa	Known RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PRSS47	A8MTI9	375 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	MYO1G	B0I1T2	1018 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CDX4	O14627	284 aa	Predicted RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	RNF113A	O15541	343 aa	Known RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	STAM2	O75886	525 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	GFPT2	O94808	682 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	SIX3	O95343	332 aa	Predicted RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	GCFC2	P16383	781 aa	Known RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ZNF182	P17025	639 aa	Predicted RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	TRIM21	P19474	475 aa	Known RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	LMO1	P25800	156 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	HADHA	P40939	763 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	AMT	P48728	403 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CLCN3	P51790	818 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PGGT1B	P53609	377 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	POLG	P54098	1239 aa	Predicted RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CSE1L	P55060	971 aa	Known RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	EVC	P57679	992 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CSTF3	Q12996	717 aa	Known RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	SHB	Q15464	509 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ALX1	Q15699	326 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	BOLA3	Q53S33	107 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	TDRD12	Q587J7	1177 aa	Known RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	FAM133B	Q5BKY9	247 aa	Known RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	FAM205BP	Q63HN1	556 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PACS1	Q6VY07	963 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CLEC17A	Q6ZS10	378 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	LINGO2	Q7L985	606 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	KIAA1328	Q86T90	577 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	FJX1	Q86VR8	437 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	FAM114A1	Q8IWE2	563 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	TEX9	Q8N6V9	391 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	GBP7	Q8N8V2	638 aa	Predicted RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	MOCOS	Q96EN8	888 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	SLC41A2	Q96JW4	573 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	LRFN5	Q96NI6	719 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	MUC13	Q9H3R2	512 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ESRP2	Q9H6T0	727 aa	Known RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	RANGRF	Q9HD47	186 aa	Predicted RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	LTB4R2	Q9NPC1	389 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	HINT3	Q9NQE9	182 aa	Known RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	HAUS2	Q9NVX0	235 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ABI3	Q9P2A4	366 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	POLG2	Q9UHN1	485 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ERVK-11	Q9UQG0	969 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	NOSIP	Q9Y314	301 aa	Known RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	N6AMT1	Q9Y5N5	214 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	STON1	Q9Y6Q2	735 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	NBAS	A2RRP1	2371 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	LCT	P09848	1927 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	MTCL1	Q9Y4B5	1905 aa	Known RBP	4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	THADA	Q6YHU6	1953 aa		4.93	□□□□□ -1.62
CACNA1C-223	ENST00000465278	C1orf226	A1L170	272 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	GOLGA6L10	A6NI86	522 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	NEMF	O60524	1076 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ALPL	P05186	524 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	IVL	P07476	585 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	HSPD1	P10809	573 aa	Known RBP	4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CYP11B2	P19099	503 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	C21orf33	P30042	268 aa	Predicted RBP	4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CDKN2A	P42771	156 aa	Known RBP	4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	MRPL12	P52815	198 aa	Known RBP	4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	HNRNPH2	P55795	449 aa	Known RBP	4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CRYZ	Q08257	329 aa	Known RBP	4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PTPN14	Q15678	1187 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	EFNB3	Q15768	340 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	TEX35	Q5T0J7	233 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ZSCAN25	Q6NSZ9	544 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	MZT2B	Q6NZ67	158 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	NCEH1	Q6PIU2	408 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	SPATA21	Q7Z572	469 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	ARHGAP12	Q8IWW6	846 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	SPATA6L	Q8N4H0	392 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	SMYD1	Q8NB12	490 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	LZIC	Q8WZA0	190 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	WASF1	Q92558	559 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	N4BP2L2	Q92802	583 aa	Predicted RBP	4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	CASP10	Q92851	521 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	PPP1R14B	Q96C90	147 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	TMEM68	Q96MH6	324 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	FAM110A	Q9BQ89	295 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	SLC39A3	Q9BRY0	314 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	NTPCR	Q9BSD7	190 aa	Known RBP	4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	SLC25A33	Q9BSK2	321 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	IFIH1	Q9BYX4	1025 aa	Known RBP	4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	VCX3B	Q9H321	246 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	GHITM	Q9H3K2	345 aa		4.92	□□□□□ -1.62
CACNA1C-223	ENST00000465278	KAT14	Q9H8E8	782 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms