RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 ZNF551Q7Z340 670 aaPredicted RBP18.19■□□□□ 0.5
TSPAN4-210ENST00000464987 PLPP6Q8IY26 295 aa18.19■□□□□ 0.5
TSPAN4-210ENST00000464987 TNIP2Q8NFZ5 429 aa18.19■□□□□ 0.5
TSPAN4-210ENST00000464987 NETO1Q8TDF5 533 aa18.19■□□□□ 0.5
TSPAN4-210ENST00000464987 FAM162AQ96A26 154 aa18.19■□□□□ 0.5
TSPAN4-210ENST00000464987 SLC47A1Q96FL8 570 aa18.19■□□□□ 0.5
TSPAN4-210ENST00000464987 PHF12Q96QT6 1004 aa18.19■□□□□ 0.5
TSPAN4-210ENST00000464987 CRISPLD2Q9H0B8 497 aa18.19■□□□□ 0.5
TSPAN4-210ENST00000464987 FAM83DQ9H4H8 585 aa18.19■□□□□ 0.5
TSPAN4-210ENST00000464987 SMURF2Q9HAU4 748 aa18.19■□□□□ 0.5
TSPAN4-210ENST00000464987 WNT6Q9Y6F9 365 aa18.19■□□□□ 0.5
TSPAN4-210ENST00000464987 TRMUO75648 421 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 TIMP1P01033 207 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 MYCLP1P12525 358 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 PTPN6P29350 595 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 SHMT2P34897 504 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 HALP42357 657 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 GZMMP51124 257 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 ALDH3A2P51648 485 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 DAG1Q14118 895 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 PON2Q15165 354 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 CCSMST1Q4G0I0 132 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 GGTA1PQ4G0N0 100 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 CDKL4Q5MAI5 379 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 CLEC4FQ8N1N0 589 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 HIC2Q96JB3 615 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 PCDH12Q9NPG4 1184 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 SPHK2Q9NRA0 654 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 TDP1Q9NUW8 608 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 EBF1Q9UH73 591 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 SNX6Q9UNH7 406 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 NOBOXO60393 691 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 CST1P01037 141 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 ALBP02768 609 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 MPC1LP0DKB6 136 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 HOXB9P17482 250 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 CDK9P50750 372 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 CHIT1Q13231 466 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 CYP2U1Q7Z449 544 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 MICU2Q8IYU8 434 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 L3MBTL4Q8NA19 623 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 ZSWIM3Q96MP5 696 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 CPPED1Q9BRF8 314 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 RIOK2Q9BVS4 552 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 NPLQ9BXD5 320 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 EMILIN2Q9BXX0 1053 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 UGT2B28Q9BY64 529 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 ERVW-1Q9UQF0 538 aa18.18■□□□□ 0.5
TSPAN4-210ENST00000464987 ZBBXA8MT70 800 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 EIF3FO00303 357 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 AMD1P17707 334 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 S100A3P33764 101 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 ABRQ12979 859 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 PLEKHS1Q5SXH7 462 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 LRIF1Q5T3J3 769 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 OR4F3Q6IEY1 312 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 TMEM179BQ7Z7N9 219 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 GALNT13Q8IUC8 556 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 GPR65Q8IYL9 337 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 FRS2Q8WU20 508 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 NCLNQ969V3 563 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 MRGPRX3Q96LB0 322 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 KCNH6Q9H252 994 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 DNAJC11Q9NVH1 559 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 TUBA8Q9NY65 449 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 CDC14AQ9UNH5 594 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 CXorf51AA0A1B0GTR3 108 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 WASH3PC4AMC7 463 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 CREG1O75629 220 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 TIMP2P16035 220 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 CYP2A7P20853 494 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 VIPR1P32241 457 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 HNMTP50135 292 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 CTSCP53634 463 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 POLR2LP62875 67 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 PMS2P3Q13401 168 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 ADNP2Q6IQ32 1131 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 CALHM3Q86XJ0 350 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 CLVS1Q8IUQ0 354 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 TCAIMQ8N3R3 496 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 AADATQ8N5Z0 425 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 ADAMTS16Q8TE57 1224 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 CMTM7Q96FZ5 175 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 HEPHQ9BQS7 1158 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 ERVK-11Q9UQG0 969 aa18.17■□□□□ 0.5
TSPAN4-210ENST00000464987 G3V2T6 193 aa18.16■□□□□ 0.5
TSPAN4-210ENST00000464987 TMX2-CTNND1H3BSU7 103 aa18.16■□□□□ 0.5
TSPAN4-210ENST00000464987 SERPINA1P01009 418 aa18.16■□□□□ 0.5
TSPAN4-210ENST00000464987 RHOP08100 348 aa18.16■□□□□ 0.5
TSPAN4-210ENST00000464987 RECQLP46063 649 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-210ENST00000464987 PREPP48147 710 aa18.16■□□□□ 0.5
TSPAN4-210ENST00000464987 CBX2Q14781 532 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-210ENST00000464987 ZDHHC20Q5W0Z9 365 aa18.16■□□□□ 0.5
TSPAN4-210ENST00000464987 FRG2Q64ET8 278 aa18.16■□□□□ 0.5
TSPAN4-210ENST00000464987 GPR141Q7Z602 305 aa18.16■□□□□ 0.5
TSPAN4-210ENST00000464987 MCOLN3Q8TDD5 553 aa18.16■□□□□ 0.5
TSPAN4-210ENST00000464987 PAWRQ96IZ0 340 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-210ENST00000464987 FRG2BQ96QU4 278 aa18.16■□□□□ 0.5
TSPAN4-210ENST00000464987 DCAF13Q9NV06 445 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms