RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 RSPH9Q9H1X1 276 aaPredicted RBP21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 STOX2Q9P2F5 926 aaPredicted RBP21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 GPR34Q9UPC5 381 aa21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 PCDHA9Q9Y5H5 950 aa21.14■□□□□ 0.97
PDLIM2-216ENST00000464275 C17orf113A0A1B0GUU1 675 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 KRT87PA6NCN2 255 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 ARNTLO00327 626 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 NPC1O15118 1278 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 PRPH2P23942 346 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 PDHA2P29803 388 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 HALP42357 657 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 BDKRB1P46663 353 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 HABP4Q5JVS0 413 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 C6orf10Q5SRN2 563 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 LIPJQ5W064 366 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 AGTRAPQ6RW13 159 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 THOC6Q86W42 341 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 CFAP206Q8IYR0 622 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 DPP10Q8N608 796 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 ERLEC1Q96DZ1 483 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 HIC2Q96JB3 615 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 CMTM6Q9NX76 183 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 GULP1Q9UBP9 304 aa21.13■□□□□ 0.97
PDLIM2-216ENST00000464275 RSL1D1O76021 490 aaKnown RBP21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 SMIM18P0DKX4 95 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 JUPP14923 745 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 VARSP26640 1264 aaKnown RBP21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 DRD3P35462 400 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 WASP42768 502 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 PLOD1Q02809 727 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 BNIP2Q12982 314 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 CHIT1Q13231 466 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 CAMK2GQ13555 558 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 ADAMTSL4Q6UY14 1074 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 PRR23BQ6ZRT6 265 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 CHPFQ8IZ52 775 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 TMEM125Q96AQ2 219 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 PKP4Q99569 1192 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 RPP25Q9BUL9 199 aaKnown RBP21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 ACPTQ9BZG2 426 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 TRIM15Q9C019 465 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 ADH1BP00325 375 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 FAM58BPP0C7Q3 252 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 TNFRSF4P43489 277 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 ZNF33BQ06732 778 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 CST6Q15828 149 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 C11orf91Q3C1V1 193 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 DHFR2Q86XF0 187 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 ALDH16A1Q8IZ83 802 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 LIX1Q8N485 282 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 ZNF513Q8N8E2 541 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 GLB1L3Q8NCI6 653 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 ZUFSPQ96AP4 578 aa21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 INTS7Q9NVH2 962 aaKnown RBP21.12■□□□□ 0.97
PDLIM2-216ENST00000464275 NUMA1Q14980 2115 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 PCM1Q15154 2024 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 NPIPB8E9PQR5 432 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 MID1O15344 667 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 PRAMEF4O60810 478 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 RNASEH2AO75792 299 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 CLPTM1O96005 669 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 PCSK2P16519 638 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 ZNF8P17098 575 aaPredicted RBP21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 MTHFRP42898 656 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 GALK1P51570 392 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 IRF8Q02556 426 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 NAE1Q13564 534 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 PRAMEF9Q5VWM5 478 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 AADATQ8N5Z0 425 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 OR56A3Q8NH54 315 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 EME1Q96AY2 570 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 DGCR14Q96DF8 476 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 COX14Q96I36 57 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 ZNF597Q96LX8 424 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 OSBPL11Q9BXB4 747 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 DPY30Q9C005 99 aa21.11■□□□□ 0.97
PDLIM2-216ENST00000464275 C1orf105O95561 183 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 C5AR1P21730 350 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 IMPA1P29218 277 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 CASP2P42575 452 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 PCDH1Q08174 1060 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 KIAA0040Q15053 153 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 CCSMST1Q4G0I0 132 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 USP39Q53GS9 565 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 AGBL4Q5VU57 503 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 FRG2Q64ET8 278 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 SLC2A7Q6PXP3 512 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 MTSS1LQ765P7 747 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 DNAJB14Q8TBM8 379 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 HM13Q8TCT9 377 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 FOXJ1Q92949 421 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 CMTM7Q96FZ5 175 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 FRG2BQ96QU4 278 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 POP7O75817 140 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 ZNF26P17031 533 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 EEFSECP57772 596 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 SLC44A4Q53GD3 710 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 PNCKQ6P2M8 343 aa21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-216ENST00000464275 ZNF547Q8IVP9 402 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms