RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 LPGAT1Q92604 370 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 DLG3Q92796 817 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 ZUFSPQ96AP4 578 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 RAB11FIP5Q9BXF6 653 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 MFRPQ9BY79 579 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 GPR83Q9NYM4 423 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 ANKMY1Q9P2S6 941 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 CRYL1Q9Y2S2 319 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 MRFAP1Q9Y605 127 aa18.1■□□□□ 0.49
SF3A1-205ENST00000463818 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.09■□□□□ 0.49
SF3A1-205ENST00000463818 CLEC18AA5D8T8 446 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 KRT87PA6NCN2 255 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 TARM1B6A8C7 271 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 H3BMM5 538 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 PEX12O00623 359 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 DPM1O60762 260 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 NIPSNAP2O75323 286 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 FKBP9O95302 570 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 KRT14P02533 472 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 CHRM3P20309 590 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 CCNFP41002 786 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 MAGEA6P43360 314 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 SRSF1Q07955 248 aaKnown RBP eCLIP18.09■□□□□ 0.49
SF3A1-205ENST00000463818 TYSND1Q2T9J0 566 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 ANKRD22Q5VYY1 191 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 KIAA0930Q6ICG6 404 aaPredicted RBP18.09■□□□□ 0.49
SF3A1-205ENST00000463818 TTC27Q6P3X3 843 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 CNSTQ6PJW8 725 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 CLEC18BQ6UXF7 455 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 CAND1Q86VP6 1230 aaKnown RBP18.09■□□□□ 0.49
SF3A1-205ENST00000463818 RAB42Q8N4Z0 105 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 CLEC18CQ8NCF0 446 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 DENND1AQ8TEH3 1009 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 MAGOHBQ96A72 148 aaKnown RBP18.09■□□□□ 0.49
SF3A1-205ENST00000463818 FAM136AQ96C01 138 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 FER1L6-AS2Q96M78 137 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 SMAD5Q99717 465 aaKnown RBP18.09■□□□□ 0.49
SF3A1-205ENST00000463818 GALPQ9UBC7 116 aa18.09■□□□□ 0.49
SF3A1-205ENST00000463818 TSR3Q9UJK0 312 aaKnown RBP18.09■□□□□ 0.49
SF3A1-205ENST00000463818 VPS4BO75351 444 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 IGHEP01854 428 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 ESR1P03372 595 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 UMODP07911 640 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 ITGAXP20702 1163 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 MCM3P25205 808 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 ADARP55265 1226 aaKnown RBP18.08■□□□□ 0.48
SF3A1-205ENST00000463818 TCTE1Q5JU00 501 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 DCAF10Q5QP82 559 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 RNF187Q5TA31 235 aaPredicted RBP18.08■□□□□ 0.48
SF3A1-205ENST00000463818 NEPROQ6NW34 567 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 JMJD6Q6NYC1 403 aaPredicted RBP18.08■□□□□ 0.48
SF3A1-205ENST00000463818 CASC4Q6P4E1 433 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 OVCH1Q7RTY7 1134 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 PPP1R32Q7Z5V6 425 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 HPS6Q86YV9 775 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 RASGEF1CQ8N431 466 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 RBMXL3Q8N7X1 1067 aaKnown RBP18.08■□□□□ 0.48
SF3A1-205ENST00000463818 HMGCLL1Q8TB92 370 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 MAGEC3Q8TD91 643 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 MS4A14Q96JA4 679 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 PDLIM2Q96JY6 352 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 MIPEPQ99797 713 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 CUTCQ9NTM9 273 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 P4HTMQ9NXG6 502 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 VPS4AQ9UN37 437 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 MAP4K5Q9Y4K4 846 aa18.08■□□□□ 0.48
SF3A1-205ENST00000463818 FLNCQ14315 2725 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 A0A1B0GX78 115 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 MAGEB16A2A368 324 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 SDR42E2A6NKP2 422 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 MASP2O00187 686 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 NRDCO43847 1150 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 CTSVO60911 334 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 SORBS2O94875 1100 aaKnown RBP18.07■□□□□ 0.48
SF3A1-205ENST00000463818 MATN4O95460 622 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 ONECUT2O95948 504 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 PIM1P11309 404 aaPredicted RBP18.07■□□□□ 0.48
SF3A1-205ENST00000463818 PKMP14618 531 aaKnown RBP18.07■□□□□ 0.48
SF3A1-205ENST00000463818 PAMP19021 973 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 OGNP20774 298 aaKnown RBP18.07■□□□□ 0.48
SF3A1-205ENST00000463818 PSMB5P28074 263 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 FASTKQ14296 549 aaKnown RBP18.07■□□□□ 0.48
SF3A1-205ENST00000463818 GBX1Q14549 363 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 GRM7Q14831 915 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 INPP5JQ15735 1006 aaPredicted RBP18.07■□□□□ 0.48
SF3A1-205ENST00000463818 CYP2A13Q16696 494 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 ANKRD20A4Q4UJ75 823 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 WASHC2DQ5SRD0 308 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 YOD1Q5VVQ6 348 aaPredicted RBP18.07■□□□□ 0.48
SF3A1-205ENST00000463818 CENPUQ71F23 418 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 GALNT16Q8N428 558 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 FAM26EQ8N5C1 309 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 CLEC1AQ8NC01 280 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 PBKQ96KB5 322 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 ZNF285Q96NJ3 590 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 SELENOSQ9BQE4 189 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 TRIM56Q9BRZ2 755 aaKnown RBP18.07■□□□□ 0.48
SF3A1-205ENST00000463818 SLAMF7Q9NQ25 335 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 IL1RAPL1Q9NZN1 696 aa18.07■□□□□ 0.48
SF3A1-205ENST00000463818 SAMD15Q9P1V8 674 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms