RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 FIGLAQ6QHK4 219 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 PRSS58Q8IYP2 241 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 SIRT6Q8N6T7 355 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 STT3BQ8TCJ2 826 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 BRIX1Q8TDN6 353 aaKnown RBP13.84□□□□□ -0.19
SMC1A-204ENST00000463684 C8orf44Q96CB5 159 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 GBP4Q96PP9 640 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 SELENOSQ9BQE4 189 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 ZNF282Q9UDV7 671 aaPredicted RBP13.84□□□□□ -0.19
SMC1A-204ENST00000463684 SETD2Q9BYW2 2564 aaPredicted RBP13.84□□□□□ -0.19
SMC1A-204ENST00000463684 DCHS2Q6V1P9 2916 aa13.84□□□□□ -0.19
SMC1A-204ENST00000463684 PCM1Q15154 2024 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 FER1L5A0AVI2 2057 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 BHMG1C9JSJ3 638 aaPredicted RBP13.83□□□□□ -0.2
SMC1A-204ENST00000463684 PRICKLE3O43900 615 aaPredicted RBP13.83□□□□□ -0.2
SMC1A-204ENST00000463684 AKR1B10O60218 316 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 BMP10O95393 424 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 F10P00742 488 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 GYPCP04921 128 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 SERPINA7P05543 415 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 ZGLP1P0C6A0 271 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 COMTP21964 271 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 CXCR2P25025 360 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 MST1P26927 711 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 RBL1P28749 1068 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 SOX11P35716 441 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 CACNG1Q06432 222 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 MSLNQ13421 630 aaPredicted RBP13.83□□□□□ -0.2
SMC1A-204ENST00000463684 SF1Q15637 639 aaKnown RBP13.83□□□□□ -0.2
SMC1A-204ENST00000463684 CNSTQ6PJW8 725 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 CDH24Q86UP0 819 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 ZGRF1Q86YA3 2104 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 C2orf73Q8N5S3 287 aaPredicted RBP13.83□□□□□ -0.2
SMC1A-204ENST00000463684 CHTF18Q8WVB6 975 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 PSMF1Q92530 271 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 MTFMTQ96DP5 389 aaKnown RBP13.83□□□□□ -0.2
SMC1A-204ENST00000463684 DNAJC1Q96KC8 554 aaKnown RBP13.83□□□□□ -0.2
SMC1A-204ENST00000463684 TBL1YQ9BQ87 522 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 GORASP1Q9BQQ3 440 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 MESP1Q9BRJ9 268 aa13.83□□□□□ -0.2
SMC1A-204ENST00000463684 FEZ2Q9UHY8 353 aaPredicted RBP13.83□□□□□ -0.2
SMC1A-204ENST00000463684 ZFHX3Q15911 3703 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 SLC5A10A0PJK1 596 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 FITM1A5D6W6 292 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 H7C0S8 307 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 SRPX2O60687 465 aaPredicted RBP13.82□□□□□ -0.2
SMC1A-204ENST00000463684 SLC19A2O60779 497 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 STK10O94804 968 aaKnown RBP13.82□□□□□ -0.2
SMC1A-204ENST00000463684 ZRANB2O95218 330 aaKnown RBP eCLIP13.82□□□□□ -0.2
SMC1A-204ENST00000463684 S1PR4O95977 384 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 MBD3O95983 291 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 RPN2P04844 631 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 OR56A5P0C7T3 313 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 PRSS56P0CW18 603 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 CD9P21926 228 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 PSMB4P28070 264 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 PKLRP30613 574 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 VSX2P58304 361 aaPredicted RBP13.82□□□□□ -0.2
SMC1A-204ENST00000463684 DBN1Q16643 649 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 DNAJC21Q5F1R6 531 aaKnown RBP13.82□□□□□ -0.2
SMC1A-204ENST00000463684 ANKRD20A2Q5SQ80 823 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 WASHC2DQ5SRD0 308 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 ANKRD20A1Q5TYW2 823 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 ANKRD20A3Q5VUR7 823 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 FAAH2Q6GMR7 532 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 PRMT9Q6P2P2 845 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 NAPRTQ6XQN6 538 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 CCDC50Q8IVM0 306 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 CEP97Q8IW35 865 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 PIANPQ8IYJ0 282 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 RCOR2Q8IZ40 523 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 ZUFSPQ96AP4 578 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 C14orf79Q96F83 325 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 PPP1R2P1Q96PQ5 205 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 ALS2CR12Q96Q35 445 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 C10orf88Q9H8K7 445 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 ENAMQ9NRM1 1142 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 NLE1Q9NVX2 485 aaPredicted RBP13.82□□□□□ -0.2
SMC1A-204ENST00000463684 PRSS21Q9Y6M0 314 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 NF1P21359 2839 aa13.82□□□□□ -0.2
SMC1A-204ENST00000463684 NUP210LQ5VU65 1888 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 hCG_1818297A0A087WSY0 165 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 HYKKA2RU49 373 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 F8W8V4 182 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 PSTPIP1O43586 416 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 CLDN14O95500 239 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 WDPCPO95876 746 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 COX6A1P12074 109 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 EMP2P54851 167 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 KRTAP10-9P60411 292 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 AP2B1P63010 937 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 ADORA2A-AS1P86434 159 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 SRSF11Q05519 484 aaKnown RBP13.81□□□□□ -0.2
SMC1A-204ENST00000463684 SPARCL1Q14515 664 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 ITIH4Q14624 930 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 IQCB1Q15051 598 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 ASTE1Q2TB18 679 aaPredicted RBP13.81□□□□□ -0.2
SMC1A-204ENST00000463684 CCDC181Q5TID7 509 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 DENND5AQ6IQ26 1287 aa13.81□□□□□ -0.2
SMC1A-204ENST00000463684 RIPOR1Q6ZS17 1223 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms