RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 STMND1H3BQB6 276 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 FAM155BO75949 473 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 STK17BO94768 372 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 SLC16A8O95907 504 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 IL2P60568 153 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 ACY1Q03154 408 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 TAP2Q03519 686 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 SRSF6Q13247 344 aaKnown RBP17.05■□□□□ 0.32
VPS52-214ENST00000463486 ZNF460Q14592 562 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 ARHGAP19Q14CB8 494 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 EFTUD2Q15029 972 aaKnown RBP eCLIP17.05■□□□□ 0.322e-6■■■■□ 25.9
VPS52-214ENST00000463486 LRRC8EQ6NSJ5 796 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 C19orf48Q6RUI8 117 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 UBE2R2Q712K3 238 aaPredicted RBP17.05■□□□□ 0.32
VPS52-214ENST00000463486 TAX1BP1Q86VP1 789 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 BPHLQ86WA6 291 aaPredicted RBP17.05■□□□□ 0.32
VPS52-214ENST00000463486 DNAJC22Q8N4W6 341 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 C19orf47Q8N9M1 422 aaKnown RBP17.05■□□□□ 0.32
VPS52-214ENST00000463486 ANKRD49Q8WVL7 239 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 CDKL2Q92772 493 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 LINGO1Q96FE5 620 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 ELMO2Q96JJ3 720 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 FCRL4Q96PJ5 515 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 GPR22Q99680 433 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 RBBP8Q99708 897 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 KLHL20Q9Y2M5 609 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 PCDHB11Q9Y5F2 797 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 TEX51A0A1B0GUA7 166 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 SLC16A5O15375 505 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 ZBTB14O43829 449 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 CTSBP07858 339 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 ZNF37AP17032 561 aaPredicted RBP17.04■□□□□ 0.32
VPS52-214ENST00000463486 PSMB5P28074 263 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 OAS2P29728 719 aaKnown RBP17.04■□□□□ 0.32
VPS52-214ENST00000463486 GP5P40197 560 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 ARL4DP49703 201 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 RGS4P49798 205 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 PDAP1Q13442 181 aaKnown RBP17.04■□□□□ 0.32
VPS52-214ENST00000463486 PHKG1Q16816 387 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 TMTC4Q5T4D3 741 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 KIAA1614Q5VZ46 1190 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 FCRL6Q6DN72 434 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 LRRC69Q6ZNQ3 347 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 PPP1R3BQ86XI6 285 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 SLC38A9Q8NBW4 561 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 OR1L3Q8NH93 324 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 SLC22A18Q96BI1 424 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 RNF31Q96EP0 1072 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 TCTN2Q96GX1 697 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 FMO2Q99518 471 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 TSPYL1Q9H0U9 437 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 CDC42EP4Q9H3Q1 356 aaKnown RBP17.04■□□□□ 0.32
VPS52-214ENST00000463486 PDE7BQ9NP56 450 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 SOHLH2Q9NX45 425 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 MTRF1LQ9UGC7 380 aaKnown RBP17.04■□□□□ 0.32
VPS52-214ENST00000463486 RARRES3Q9UL19 164 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 NFU1Q9UMS0 254 aa17.04■□□□□ 0.32
VPS52-214ENST00000463486 HMX2A2RU54 273 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 KRT37O76014 449 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 C8GP07360 202 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 RHOXF2BP0C7M4 288 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 WT1P19544 449 aaPredicted RBP17.03■□□□□ 0.32
VPS52-214ENST00000463486 MAGP20916 626 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 IMPA1P29218 277 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 STX2P32856 288 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 GRIA3P42263 894 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 PNLIPRP1P54315 467 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 POU4F1Q01851 419 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 ILF2Q12905 390 aaKnown RBP17.03■□□□□ 0.32
VPS52-214ENST00000463486 ZKSCAN8Q15776 578 aaPredicted RBP17.03■□□□□ 0.32
VPS52-214ENST00000463486 COL28A1Q2UY09 1125 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 GRTP1Q5TC63 336 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 PPM1NQ8N819 430 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 OR2L3Q8NG85 312 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 OR8K5Q8NH50 307 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 SMPDL3AQ92484 453 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 RHOXF2Q9BQY4 288 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 PRORYQ9H606 182 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 CAB39LQ9H9S4 337 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 PARVBQ9HBI1 364 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 POPDC3Q9HBV1 291 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 LNPEPQ9UIQ6 1025 aa17.03■□□□□ 0.32
VPS52-214ENST00000463486 SEC16AO15027 2179 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 CACNA1GO43497 2377 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 IGKV1-8A0A0C4DH67 115 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 TERTO14746 1132 aaKnown RBP17.02■□□□□ 0.32
VPS52-214ENST00000463486 RAD1O60671 282 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 KIAA0754O94854 1291 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 FKBP9O95302 570 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 SAT1P21673 171 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 HSD17B2P37059 387 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 CSRP3P50461 194 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 SP140Q13342 867 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 NAB1Q13506 487 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 MAP7Q14244 749 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 SF1Q15637 639 aaKnown RBP17.02■□□□□ 0.32
VPS52-214ENST00000463486 PPP1R3AQ16821 1122 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 PRAMEF17Q5VTA0 474 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 SUSD1Q6UWL2 747 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 SBSNQ6UWP8 590 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms