RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 KIAA0754O94854 1291 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 RECKO95980 971 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 STX2P32856 288 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 ITGA1P56199 1179 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 TIAL1Q01085 375 aaKnown RBP eCLIP12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 GPR19Q15760 415 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 CDHR3Q6ZTQ4 885 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 TIPARPQ7Z3E1 657 aaKnown RBP12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 PDLIM5Q96HC4 596 aaKnown RBP12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 NDNQ99608 321 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 PLCL2Q9UPR0 1127 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 ZNF891A8MT65 544 aaPredicted RBP12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 C21orf140B9A014 251 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 CYP2A7P20853 494 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 MCM3P25205 808 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 GABRA4P48169 554 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 CDKN2DP55273 166 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 IL2P60568 153 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 ZC3H12BQ5HYM0 836 aaKnown RBP12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 RBM20Q5T481 1227 aaKnown RBP12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 PWWP2BQ6NUJ5 590 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 FBXO38Q6PIJ6 1188 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 STRA8Q7Z7C7 330 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 RELL1Q8IUW5 271 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 TMEM126BQ8IUX1 230 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 DNAJC22Q8N4W6 341 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 GPATCH11Q8N954 259 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 MCOLN3Q8TDD5 553 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 SLC45A3Q96JT2 553 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 IL17FQ96PD4 163 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 NRTNQ99748 197 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 CPNE1Q99829 537 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 DPH2Q9BQC3 489 aaPredicted RBP12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 MCMBPQ9BTE3 642 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 SLC12A9Q9BXP2 914 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 GPN2Q9H9Y4 310 aaPredicted RBP12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 MTRF1LQ9UGC7 380 aaKnown RBP12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 PADI1Q9ULC6 663 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 PCDHGA6Q9Y5G7 932 aa12.59□□□□□ -0.39
R3HDM1-213ENST00000463230 FAM159BA6NKW6 160 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 TMEM150CB9EJG8 249 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 SCRG1O75711 98 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 LIFP15018 202 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 PVRP15151 417 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 ZNF28P17035 718 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 MAGEA4P43358 317 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 PNLIPRP1P54315 467 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 ABATP80404 500 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 GUCY2DQ02846 1103 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 CUL1Q13616 776 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 CCSMST1Q4G0I0 132 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 YOD1Q5VVQ6 348 aaPredicted RBP12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 TLDC1Q6P9B6 456 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 PAQR3Q6TCH7 311 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 UBE2R2Q712K3 238 aaPredicted RBP12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 TRIM73Q86UV7 250 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 GPR135Q8IZ08 494 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 GALNT6Q8NCL4 622 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 N4BP2L2Q92802 583 aaPredicted RBP12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 VPS39Q96JC1 886 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 ELMO2Q96JJ3 720 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 PKP4Q99569 1192 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 PARVBQ9HBI1 364 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 CPNE5Q9HCH3 593 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 ZDHHC18Q9NUE0 388 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 UTP6Q9NYH9 597 aaKnown RBP12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 TXNDC16Q9P2K2 825 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 KCND3Q9UK17 655 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 NOVA2Q9UNW9 492 aaKnown RBP12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 RUVBL2Q9Y230 463 aaKnown RBP12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 PCDHGA4Q9Y5G9 962 aa12.58□□□□□ -0.39
R3HDM1-213ENST00000463230 FREM2Q5SZK8 3169 aa12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 E7EQ34 232 aa12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 ITGB2P05107 769 aa12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 F7P08709 466 aaPredicted RBP12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 ENO2P09104 434 aaPredicted RBP12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 CMPK1P30085 196 aa12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 RELAQ04206 551 aa12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 SF1Q15637 639 aaKnown RBP12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 C3orf62Q6ZUJ4 267 aa12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 VASH2Q86V25 355 aa12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 NKAPQ8N5F7 415 aaKnown RBP12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 OR1L3Q8NH93 324 aa12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 TSPAN17Q96FV3 270 aa12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 CCDC138Q96M89 665 aa12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 PCBD2Q9H0N5 130 aa12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 SRPK3Q9UPE1 567 aa12.58□□□□□ -0.4
R3HDM1-213ENST00000463230 A0A1W2PPV9 198 aa12.57□□□□□ -0.4
R3HDM1-213ENST00000463230 TCRBV9S1A1TA0A576 114 aa12.57□□□□□ -0.4
R3HDM1-213ENST00000463230 ERVH48-1M5A8F1 160 aa12.57□□□□□ -0.4
R3HDM1-213ENST00000463230 TERTO14746 1132 aaKnown RBP12.57□□□□□ -0.4
R3HDM1-213ENST00000463230 TIAF1O95411 115 aa12.57□□□□□ -0.4
R3HDM1-213ENST00000463230 KLK3P07288 261 aaPredicted RBP12.57□□□□□ -0.4
R3HDM1-213ENST00000463230 HRH2P25021 359 aa12.57□□□□□ -0.4
R3HDM1-213ENST00000463230 SSTR1P30872 391 aa12.57□□□□□ -0.4
R3HDM1-213ENST00000463230 RPA3P35244 121 aaPredicted RBP12.57□□□□□ -0.4
R3HDM1-213ENST00000463230 GP5P40197 560 aa12.57□□□□□ -0.4
R3HDM1-213ENST00000463230 AP1S2P56377 157 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms