RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 AGAP4Q96P64 663 aa15.04■□□□□ -0
SND1-203ENST00000463020 IL17FQ96PD4 163 aa15.04■□□□□ -0
SND1-203ENST00000463020 TBL1YQ9BQ87 522 aa15.04■□□□□ -0
SND1-203ENST00000463020 NDC1Q9BTX1 674 aa15.04■□□□□ -0
SND1-203ENST00000463020 GUCA1BQ9UMX6 200 aa15.04■□□□□ -0
SND1-203ENST00000463020 PLCL2Q9UPR0 1127 aa15.04■□□□□ -0
SND1-203ENST00000463020 REXO2Q9Y3B8 237 aaKnown RBP15.04■□□□□ -0
SND1-203ENST00000463020 ALG6Q9Y672 507 aa15.04■□□□□ -0
SND1-203ENST00000463020 A0A1B0GX78 115 aa15.03■□□□□ -0
SND1-203ENST00000463020 KRT87PA6NCN2 255 aa15.03■□□□□ -0
SND1-203ENST00000463020 HACD1B0YJ81 288 aa15.03■□□□□ -0
SND1-203ENST00000463020 ISM1B1AKI9 464 aa15.03■□□□□ -0
SND1-203ENST00000463020 ANXA9O76027 345 aa15.03■□□□□ -0
SND1-203ENST00000463020 CRTAMO95727 393 aa15.03■□□□□ -0
SND1-203ENST00000463020 SNRPB2P08579 225 aaKnown RBP15.03■□□□□ -0
SND1-203ENST00000463020 OR1D4P47884 311 aa15.03■□□□□ -0
SND1-203ENST00000463020 CSE1LP55060 971 aaKnown RBP15.03■□□□□ -0
SND1-203ENST00000463020 GRB7Q14451 532 aa15.03■□□□□ -0
SND1-203ENST00000463020 TCEAL1Q15170 157 aa15.03■□□□□ -0
SND1-203ENST00000463020 SLC5A12Q1EHB4 618 aa15.03■□□□□ -0
SND1-203ENST00000463020 GLIPR1L2Q4G1C9 344 aa15.03■□□□□ -0
SND1-203ENST00000463020 HOOK3Q86VS8 718 aa15.03■□□□□ -0
SND1-203ENST00000463020 VRK3Q8IV63 474 aa15.03■□□□□ -0
SND1-203ENST00000463020 MCATQ8IVS2 390 aaKnown RBP15.03■□□□□ -0
SND1-203ENST00000463020 OR5K2Q8NHB8 316 aa15.03■□□□□ -0
SND1-203ENST00000463020 C8orf44Q96CB5 159 aa15.03■□□□□ -0
SND1-203ENST00000463020 PLA2G3Q9NZ20 509 aa15.03■□□□□ -0
SND1-203ENST00000463020 SMARCAL1Q9NZC9 954 aa15.03■□□□□ -0
SND1-203ENST00000463020 STOX2Q9P2F5 926 aaPredicted RBP15.03■□□□□ -0
SND1-203ENST00000463020 COPG2Q9UBF2 871 aa15.03■□□□□ -0
SND1-203ENST00000463020 MAU2Q9Y6X3 613 aa15.03■□□□□ -0
SND1-203ENST00000463020 SLC5A10A0PJK1 596 aa15.02■□□□□ -0
SND1-203ENST00000463020 FANCGO15287 622 aa15.02■□□□□ -0
SND1-203ENST00000463020 OR1I1O60431 355 aa15.02■□□□□ -0
SND1-203ENST00000463020 JRKO75564 520 aa15.02■□□□□ -0
SND1-203ENST00000463020 ONECUT2O95948 504 aa15.02■□□□□ -0
SND1-203ENST00000463020 F10P00742 488 aa15.02■□□□□ -0
SND1-203ENST00000463020 CELA2AP08217 269 aa15.02■□□□□ -0
SND1-203ENST00000463020 PKLRP30613 574 aa15.02■□□□□ -0
SND1-203ENST00000463020 PER3P56645 1201 aa15.02■□□□□ -0
SND1-203ENST00000463020 OTUD4Q01804 1114 aaKnown RBP15.02■□□□□ -0
SND1-203ENST00000463020 GPR33Q49SQ1 333 aa15.02■□□□□ -0
SND1-203ENST00000463020 AADACL2Q6P093 401 aa15.02■□□□□ -0
SND1-203ENST00000463020 TBC1D21Q8IYX1 336 aa15.02■□□□□ -0
SND1-203ENST00000463020 ACTL9Q8TC94 416 aa15.02■□□□□ -0
SND1-203ENST00000463020 LKAAEAR1Q8TD35 194 aa15.02■□□□□ -0
SND1-203ENST00000463020 ELMO1Q92556 727 aa15.02■□□□□ -0
SND1-203ENST00000463020 FKBP10Q96AY3 582 aa15.02■□□□□ -0
SND1-203ENST00000463020 TRIM56Q9BRZ2 755 aaKnown RBP15.02■□□□□ -0
SND1-203ENST00000463020 LHPPQ9H008 270 aa15.02■□□□□ -0
SND1-203ENST00000463020 SLC26A1Q9H2B4 701 aa15.02■□□□□ -0
SND1-203ENST00000463020 OLAHQ9NV23 265 aa15.02■□□□□ -0
SND1-203ENST00000463020 NLE1Q9NVX2 485 aaPredicted RBP15.02■□□□□ -0
SND1-203ENST00000463020 OR6C2Q9NZP2 312 aa15.02■□□□□ -0
SND1-203ENST00000463020 H7C0S8 307 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 APOC4-APOC2K7ER74 178 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 PCDH17O14917 1159 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 KCNN4O15554 427 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 APOC2P02655 101 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 TLR1Q15399 786 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 TUBB8Q3ZCM7 444 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 TEX35Q5T0J7 233 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 B3GNTL1Q67FW5 361 aaPredicted RBP15.01□□□□□ -0.01
SND1-203ENST00000463020 KCTD11Q693B1 232 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 ITPRIPL1Q6GPH6 555 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 ARHGEF18Q6ZSZ5 1173 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 KLHDC8BQ8IXV7 354 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 PRSS58Q8IYP2 241 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 OR1N1Q8NGS0 311 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 HEXDCQ8WVB3 486 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 PSMF1Q92530 271 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 RELTQ969Z4 430 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 CDKN2AIPNLQ96HQ2 116 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 WDR54Q9H977 334 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 SYNPO2LQ9H987 977 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 ARNT2Q9HBZ2 717 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 ZNF160Q9HCG1 818 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 CUTCQ9NTM9 273 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 PCDHA13Q9Y5I0 950 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 MTORP42345 2549 aa15.01□□□□□ -0.01
SND1-203ENST00000463020 A0A0U1RQJ8 604 aa15□□□□□ -0.01
SND1-203ENST00000463020 VSTM2BA6NLU5 285 aa15□□□□□ -0.01
SND1-203ENST00000463020 FFAR3O14843 346 aa15□□□□□ -0.01
SND1-203ENST00000463020 LIN7AO14910 233 aaPredicted RBP15□□□□□ -0.01
SND1-203ENST00000463020 DSCR3O14972 297 aa15□□□□□ -0.01
SND1-203ENST00000463020 GPR42O15529 346 aa15□□□□□ -0.01
SND1-203ENST00000463020 KLHL41O60662 606 aa15□□□□□ -0.01
SND1-203ENST00000463020 CTSVO60911 334 aa15□□□□□ -0.01
SND1-203ENST00000463020 ZRANB2O95218 330 aaKnown RBP eCLIP15□□□□□ -0.01
SND1-203ENST00000463020 AP2A1O95782 977 aa15□□□□□ -0.01
SND1-203ENST00000463020 TUBBP07437 444 aa15□□□□□ -0.01
SND1-203ENST00000463020 H2AFXP16104 143 aaPredicted RBP15□□□□□ -0.01
SND1-203ENST00000463020 MST1P26927 711 aa15□□□□□ -0.01
SND1-203ENST00000463020 MAGEA1P43355 309 aa15□□□□□ -0.01
SND1-203ENST00000463020 RIPPLY3P57055 190 aa15□□□□□ -0.01
SND1-203ENST00000463020 CKAP4Q07065 602 aaKnown RBP15□□□□□ -0.01
SND1-203ENST00000463020 MFAP5Q13361 173 aa15□□□□□ -0.01
SND1-203ENST00000463020 POU6F1Q14863 301 aa15□□□□□ -0.01
SND1-203ENST00000463020 KIR2DS3Q14952 304 aa15□□□□□ -0.01
SND1-203ENST00000463020 CDSNQ15517 529 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms