RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CRB2Q5IJ48 1285 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 TMTC4Q5T4D3 741 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 LYPLAL1Q5VWZ2 237 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 ARMC3Q5W041 872 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 NAPRTQ6XQN6 538 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 MED25Q71SY5 747 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 MAMDC2Q7Z304 686 aaPredicted RBP7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 MRGPREQ86SM8 312 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 HPS6Q86YV9 775 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 TMEM151BQ8IW70 566 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 PPIL6Q8IXY8 311 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 CFAP206Q8IYR0 622 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 TMEM102Q8N9M5 508 aaPredicted RBP7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 OR4E2Q8NGC2 313 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 SNRNP40Q96DI7 357 aaKnown RBP7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 CLIP3Q96DZ5 547 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 SIGLEC10Q96LC7 697 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 SLC29A3Q9BZD2 475 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 P2RY12Q9H244 342 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 ACTR5Q9H9F9 607 aaPredicted RBP7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 PLAC1Q9HBJ0 212 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 XAB2Q9HCS7 855 aaKnown RBP7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 C1GALT1Q9NS00 363 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 ASIC3Q9UHC3 531 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 CDYLQ9Y232 598 aa7.65□□□□□ -1.18
CDC42BPA-210ENST00000462553 NF1P21359 2839 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 FAM237BA0A1B0GVD1 139 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 IQCF5A8MTL0 148 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 MASP2O00187 686 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 PRMT5O14744 637 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 CD3EAPO15446 510 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 TTI1O43156 1089 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 CNOT3O75175 753 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 GPC4O75487 556 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 VAPBO95292 243 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 CBX6O95503 412 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 FTH1P02794 183 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 POLBP06746 335 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 KLK3P07288 261 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 CTSBP07858 339 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 F7P08709 466 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 CDH3P22223 829 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 RPS3P23396 243 aaKnown RBP eCLIP7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 ACADLP28330 430 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 PRDX3P30048 256 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 CCR7P32248 378 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 GABRA4P48169 554 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 FOXL2P58012 376 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 ETF1P62495 437 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 DHX9Q08211 1270 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 RPA4Q13156 261 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 PPP1R7Q15435 360 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 PLEKHN1Q494U1 663 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 ANKRD20A4Q4UJ75 823 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 FASTKD1Q53R41 847 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 AARS2Q5JTZ9 985 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 CTSL3PQ5NE16 218 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 VWA5B1Q5TIE3 1220 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 ARMC6Q6NXE6 501 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 SYT10Q6XYQ8 523 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 CDHR3Q6ZTQ4 885 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 HOOK3Q86VS8 718 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 TICAM1Q8IUC6 712 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 VRK3Q8IV63 474 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 KLHL7Q8IXQ5 586 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 ADGRF3Q8IZF5 1079 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 ACVR1CQ8NER5 493 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 OR52E1Q8NGJ3 308 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 FLVCR1-AS1Q8TAF5 88 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 PRR7Q8TB68 274 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 ELMO1Q92556 727 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 LPGAT1Q92604 370 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 ZNF669Q96BR6 464 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 BIRC8Q96P09 236 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 TRAPPC9Q96Q05 1148 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 BARD1Q99728 777 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 KLHL25Q9H0H3 589 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 VPS37BQ9H9H4 285 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 FANCEQ9HB96 536 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 SYTL2Q9HCH5 934 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 SLAMF7Q9NQ25 335 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 ASF1BQ9NVP2 202 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 RNF14Q9UBS8 474 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 NTNG1Q9Y2I2 539 aa7.64□□□□□ -1.19
CDC42BPA-210ENST00000462553 MTORP42345 2549 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 GSAPA4D1B5 854 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 SDR42E2A6NKP2 422 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 CCDC188H7C350 402 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 MATN2O00339 956 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 QSOX1O00391 747 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 LIN7AO14910 233 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 ZNF749O43361 778 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 USP1O94782 785 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 SEC31AO94979 1220 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 OR56A5P0C7T3 313 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 CBSLP0DN79 551 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 OGNP20774 298 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 CYP2A7P20853 494 aa7.63□□□□□ -1.19
CDC42BPA-210ENST00000462553 AOAHP28039 575 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms