RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 SYT16Q17RD7 645 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 GNASQ5JWF2 1037 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 COLEC12Q5KU26 742 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 TMEM132CQ8N3T6 1108 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 APOL4Q9BPW4 351 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 CD244Q9BZW8 370 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 DCSTAMPQ9H295 470 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 GPRC5BQ9NZH0 403 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 PDP1Q9P0J1 537 aaPredicted RBP17.99■□□□□ 0.47
HPS3-204ENST00000462030 NDRG4Q9ULP0 352 aaKnown RBP17.99■□□□□ 0.47
HPS3-204ENST00000462030 ERVW-1Q9UQF0 538 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 OARD1Q9Y530 152 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 VWA8A3KMH1 1905 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 PAX3P23760 479 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 S100A3P33764 101 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 SGSHP51688 502 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 RPS14P62263 151 aaKnown RBP17.98■□□□□ 0.47
HPS3-204ENST00000462030 IRF5Q13568 498 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 SMU1Q2TAY7 513 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 DOK6Q6PKX4 331 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 USP50Q70EL3 339 aaPredicted RBP17.98■□□□□ 0.47
HPS3-204ENST00000462030 VTCN1Q7Z7D3 282 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 STK40Q8N2I9 435 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 TSSK3Q96PN8 268 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 FAM126AQ9BYI3 521 aaPredicted RBP17.98■□□□□ 0.47
HPS3-204ENST00000462030 CRISPLD1Q9H336 500 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 ASIC5Q9NY37 505 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 ERVK-11Q9UQG0 969 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 MAN2B2Q9Y2E5 1009 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 Q9Y3F1 56 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 PRSS21Q9Y6M0 314 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 WNT9AO14904 365 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 TBX1O43435 398 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 WBP4O75554 376 aaKnown RBP17.98■□□□□ 0.47
HPS3-204ENST00000462030 SEPHS1P49903 392 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 VLDLRP98155 873 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 MVKQ03426 396 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 CACNG1Q06432 222 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 ABHD18Q0P651 414 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 CDC20Q12834 499 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 ATAD3BQ5T9A4 648 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 SLC22A15Q8IZD6 547 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 CLDN19Q8N6F1 224 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 EFHD2Q96C19 240 aaPredicted RBP17.98■□□□□ 0.47
HPS3-204ENST00000462030 ULK4Q96C45 1275 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 ADGRE3Q9BY15 652 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 ACPTQ9BZG2 426 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 TM9SF3Q9HD45 589 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 IL1RAPQ9NPH3 570 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 PPT2Q9UMR5 302 aa17.98■□□□□ 0.47
HPS3-204ENST00000462030 SAMD4AQ9UPU9 718 aaKnown RBP17.98■□□□□ 0.47
HPS3-204ENST00000462030 NTRK1P04629 796 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 TACR1P25103 407 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 LIPAP38571 399 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 OR1G1P47890 313 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 FADDQ13158 208 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 PRSS36Q5K4E3 855 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 FAM171A1Q5VUB5 890 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 FAM151BQ6UXP7 276 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 LINGO4Q6UY18 593 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 CHCHD4Q8N4Q1 142 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 USP7Q93009 1102 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 SIGLEC11Q96RL6 698 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 PARVBQ9HBI1 364 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 SIRT5Q9NXA8 310 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 IL17CQ9P0M4 197 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 ATP11BQ9Y2G3 1177 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 CLDN24A6NM45 220 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 H0Y626 953 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 PCDHGA12O60330 932 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 ACSL4O60488 711 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 LRATO95237 230 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 CCNDBP1O95273 360 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 TRIM16O95361 564 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 CTPS1P17812 591 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 PCYT1AP49585 367 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 ARHGDIAP52565 204 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 CREMQ03060 361 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 SF3B4Q15427 424 aaKnown RBP eCLIP17.97■□□□□ 0.47
HPS3-204ENST00000462030 CPSF6Q16630 551 aaKnown RBP eCLIP17.97■□□□□ 0.47
HPS3-204ENST00000462030 C5orf22Q49AR2 442 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 STEAP3Q658P3 488 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 NEK10Q6ZWH5 1172 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 SAPCD2Q86UD0 394 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 APH1BQ8WW43 257 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 TBC1D20Q96BZ9 403 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 SEPT5Q99719 369 aaPredicted RBP17.97■□□□□ 0.47
HPS3-204ENST00000462030 CTRCQ99895 268 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 CLPBQ9H078 707 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 ABCG8Q9H221 673 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 SP140LQ9H930 580 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 CPNE5Q9HCH3 593 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 CCNB1IP1Q9NPC3 277 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 KRT84Q9NSB2 600 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 TRPS1Q9UHF7 1281 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 PCDHB1Q9Y5F3 818 aa17.97■□□□□ 0.47
HPS3-204ENST00000462030 WDR47O94967 919 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 KCNK2O95069 426 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 BMP1P13497 986 aa17.96■□□□□ 0.47
HPS3-204ENST00000462030 SPNP16150 400 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms