RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CXCR5P32302 372 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 CCNFP41002 786 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 PGDP52209 483 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 ARSFP54793 590 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 RRADP55042 308 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 SOX8P57073 446 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 GPS1Q13098 491 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 SF1Q15637 639 aaKnown RBP8.8□□□□□ -1
BRCA1-207ENST00000461798 CYP1B1Q16678 543 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 NKAIN1Q4KMZ8 207 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 ZC3H12BQ5HYM0 836 aaKnown RBP8.8□□□□□ -1
BRCA1-207ENST00000461798 COLEC12Q5KU26 742 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 CTSL3PQ5NE16 218 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 FCRL6Q6DN72 434 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 FIGLAQ6QHK4 219 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 OTOAQ7RTW8 1153 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 CAND1Q86VP6 1230 aaKnown RBP8.8□□□□□ -1
BRCA1-207ENST00000461798 RAB43Q86YS6 212 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 ZNF655Q8N720 491 aaPredicted RBP8.8□□□□□ -1
BRCA1-207ENST00000461798 OR2Y1Q8NGV0 311 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 CFAP61Q8NHU2 1237 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 MAGEC3Q8TD91 643 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 PTERQ96BW5 349 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 PBKQ96KB5 322 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 IL17FQ96PD4 163 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 NDC1Q9BTX1 674 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 SLC22A11Q9NSA0 550 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 INTS7Q9NVH2 962 aaKnown RBP8.8□□□□□ -1
BRCA1-207ENST00000461798 SYBUQ9NX95 663 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 KLHL42Q9P2K6 505 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 SLC39A10Q9ULF5 831 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 ZNF451Q9Y4E5 1061 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 HECTD1Q9ULT8 2610 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 FAM237BA0A1B0GVD1 139 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 FITM1A5D6W6 292 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 SDR42E2A6NKP2 422 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 CNOT3O75175 753 aaKnown RBP8.79□□□□□ -1
BRCA1-207ENST00000461798 AVILO75366 819 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 KRT14P02533 472 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 ALBP02768 609 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 PAMP19021 973 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 FMO4P31512 558 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 COILP38432 576 aaPredicted RBP8.79□□□□□ -1
BRCA1-207ENST00000461798 GRIA3P42263 894 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 MAGEA3P43357 314 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 EIF3BP55884 814 aaKnown RBP8.79□□□□□ -1
BRCA1-207ENST00000461798 CHAF1BQ13112 559 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 ATP1A4Q13733 1029 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 UBAP2LQ14157 1087 aaKnown RBP8.79□□□□□ -1
BRCA1-207ENST00000461798 CYP2A13Q16696 494 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 DEFB110Q30KQ9 67 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 CCSMST1Q4G0I0 132 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 TCTE1Q5JU00 501 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 C1orf189Q5VU69 101 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 FAM69BQ5VUD6 431 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 MLIPQ5VWP3 458 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 NEPROQ6NW34 567 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 TTC27Q6P3X3 843 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 CES3Q6UWW8 571 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 CENPUQ71F23 418 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 MRGPREQ86SM8 312 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 FAM20CQ8IXL6 584 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 RAB42Q8N4Z0 105 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 FDCSPQ8NFU4 85 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 OR2A1Q8NGT9 310 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 GSDMBQ8TAX9 411 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 DLG3Q92796 817 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 MAGOHBQ96A72 148 aaKnown RBP8.79□□□□□ -1
BRCA1-207ENST00000461798 FKBP10Q96AY3 582 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 FOPNLQ96NB1 174 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 SMAD5Q99717 465 aaKnown RBP8.79□□□□□ -1
BRCA1-207ENST00000461798 SLC26A1Q9H2B4 701 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 XAB2Q9HCS7 855 aaKnown RBP8.79□□□□□ -1
BRCA1-207ENST00000461798 TXLNGQ9NUQ3 528 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 INTS10Q9NVR2 710 aaKnown RBP8.79□□□□□ -1
BRCA1-207ENST00000461798 IL1RAPL1Q9NZN1 696 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 SPATA7Q9P0W8 599 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.79□□□□□ -1
BRCA1-207ENST00000461798 C5AR2Q9P296 337 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 IFT80Q9P2H3 777 aaPredicted RBP8.79□□□□□ -1
BRCA1-207ENST00000461798 DHCR7Q9UBM7 475 aaKnown RBP8.79□□□□□ -1
BRCA1-207ENST00000461798 GPN3Q9UHW5 284 aaPredicted RBP8.79□□□□□ -1
BRCA1-207ENST00000461798 KLHL20Q9Y2M5 609 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 NFS1Q9Y697 457 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 FLNCQ14315 2725 aa8.79□□□□□ -1
BRCA1-207ENST00000461798 MED13Q9UHV7 2174 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 ZCWPW2A0A1B0GU75 182 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 A0A1B0GX78 115 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 A0A1W2PPV9 198 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 GOLGA8KD6RF30 607 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 GOLGA8TH3BQL2 631 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 DSCR3O14972 297 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 KLHL41O60662 606 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 DPM1O60762 260 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 NIPSNAP2O75323 286 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 SORBS2O94875 1100 aaKnown RBP8.78□□□□□ -1
BRCA1-207ENST00000461798 UMODP07911 640 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 ERGP11308 486 aa8.78□□□□□ -1
BRCA1-207ENST00000461798 PIM1P11309 404 aaPredicted RBP8.78□□□□□ -1
BRCA1-207ENST00000461798 PKMP14618 531 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms