RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 ZNF552Q9H707 407 aaPredicted RBP17.16■□□□□ 0.34
SSB-206ENST00000461708 ATP13A2Q9NQ11 1180 aa17.16■□□□□ 0.34
SSB-206ENST00000461708 CHRAC1Q9NRG0 131 aa17.16■□□□□ 0.34
SSB-206ENST00000461708 SLC22A11Q9NSA0 550 aa17.16■□□□□ 0.34
SSB-206ENST00000461708 TREX1Q9NSU2 369 aa17.16■□□□□ 0.34
SSB-206ENST00000461708 IL1RAPL1Q9NZN1 696 aa17.16■□□□□ 0.34
SSB-206ENST00000461708 KLK4Q9Y5K2 254 aa17.16■□□□□ 0.34
SSB-206ENST00000461708 MYO9AB2RTY4 2548 aa17.16■□□□□ 0.34
SSB-206ENST00000461708 FITM1A5D6W6 292 aa17.15■□□□□ 0.34
SSB-206ENST00000461708 AGPSO00116 658 aa17.15■□□□□ 0.34
SSB-206ENST00000461708 DSCR3O14972 297 aa17.15■□□□□ 0.34
SSB-206ENST00000461708 PRICKLE3O43900 615 aaPredicted RBP17.15■□□□□ 0.34
SSB-206ENST00000461708 SRPX2O60687 465 aaPredicted RBP17.15■□□□□ 0.34
SSB-206ENST00000461708 ITGAXP20702 1163 aa17.15■□□□□ 0.34
SSB-206ENST00000461708 RPS3P23396 243 aaKnown RBP eCLIP17.15■□□□□ 0.34
SSB-206ENST00000461708 MMP11P24347 488 aa17.15■□□□□ 0.34
SSB-206ENST00000461708 AIMP2Q13155 320 aaKnown RBP17.15■□□□□ 0.34
SSB-206ENST00000461708 GRM7Q14831 915 aa17.15■□□□□ 0.34
SSB-206ENST00000461708 CCNG2Q16589 344 aa17.15■□□□□ 0.34
SSB-206ENST00000461708 CYP2A13Q16696 494 aa17.15■□□□□ 0.34
SSB-206ENST00000461708 PRR30Q53SZ7 412 aaPredicted RBP17.15■□□□□ 0.34
SSB-206ENST00000461708 FCRL6Q6DN72 434 aa17.15■□□□□ 0.34
SSB-206ENST00000461708 LMNTD1Q8N9Z9 388 aa17.15■□□□□ 0.34
SSB-206ENST00000461708 LKAAEAR1Q8TD35 194 aa17.15■□□□□ 0.34
SSB-206ENST00000461708 RAD51AP1Q96B01 352 aa17.15■□□□□ 0.34
SSB-206ENST00000461708 PLEKHB1Q9UF11 243 aaPredicted RBP17.15■□□□□ 0.34
SSB-206ENST00000461708 GNPTGQ9UJJ9 305 aa17.15■□□□□ 0.34
SSB-206ENST00000461708 NXT1Q9UKK6 140 aaKnown RBP17.15■□□□□ 0.34
SSB-206ENST00000461708 DRG1Q9Y295 367 aaKnown RBP17.15■□□□□ 0.34
SSB-206ENST00000461708 ZKSCAN5Q9Y2L8 839 aa17.15■□□□□ 0.34
SSB-206ENST00000461708 IQCF5A8MTL0 148 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 KRT86O43790 486 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 SEMA7AO75326 666 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 ETS1P14921 441 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 ALAS2P22557 587 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 RPL22P35268 128 aaKnown RBP17.14■□□□□ 0.33
SSB-206ENST00000461708 NPY2RP49146 381 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 RAPSNQ13702 412 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 SLC9A5Q14940 896 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 SF1Q15637 639 aaKnown RBP17.14■□□□□ 0.33
SSB-206ENST00000461708 FAM214AQ32MH5 1076 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 C4orf17Q53FE4 359 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 ARMC3Q5W041 872 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 PTRHD1Q6GMV3 140 aaKnown RBP17.14■□□□□ 0.33
SSB-206ENST00000461708 FIGLAQ6QHK4 219 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 TTLL10Q6ZVT0 673 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 RAB42Q8N4Z0 105 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 CFAP61Q8NHU2 1237 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 GSDMBQ8TAX9 411 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 SNRNP40Q96DI7 357 aaKnown RBP17.14■□□□□ 0.33
SSB-206ENST00000461708 BARD1Q99728 777 aaKnown RBP17.14■□□□□ 0.33
SSB-206ENST00000461708 MRM3Q9HC36 420 aaKnown RBP17.14■□□□□ 0.33
SSB-206ENST00000461708 LUZP4Q9P127 313 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.14■□□□□ 0.33
SSB-206ENST00000461708 MARCH4Q9P2E8 410 aaPredicted RBP17.14■□□□□ 0.33
SSB-206ENST00000461708 SLC39A10Q9ULF5 831 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 KLHL20Q9Y2M5 609 aa17.14■□□□□ 0.33
SSB-206ENST00000461708 CCNFP41002 786 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 CDK16Q00536 496 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 SNX1Q13596 522 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 SIX1Q15475 284 aaPredicted RBP17.13■□□□□ 0.33
SSB-206ENST00000461708 NKG7Q16617 165 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 CRB2Q5IJ48 1285 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 MEI1Q5TIA1 1274 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 Q6ZS92 163 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 LDB1Q86U70 411 aaPredicted RBP17.13■□□□□ 0.33
SSB-206ENST00000461708 FAM20CQ8IXL6 584 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 KRT222Q8N1A0 295 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 ZADH2Q8N4Q0 377 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 VPS50Q96JG6 964 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 IL17FQ96PD4 163 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 SELENOSQ9BQE4 189 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 CUTCQ9NTM9 273 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 BFARQ9NZS9 450 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 CRYBG3Q68DQ2 2970 aa17.13■□□□□ 0.33
SSB-206ENST00000461708 MDC1Q14676 2089 aaKnown RBP17.12■□□□□ 0.33
SSB-206ENST00000461708 CELSR2Q9HCU4 2923 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 WIPF3A6NGB9 483 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 NDUFS3O75489 264 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 CBX6O95503 412 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 C1orf105O95561 183 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 ATP5DP30049 168 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 NAA25Q14CX7 972 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 RPS6KA1Q15418 735 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 OTOAQ7RTW8 1153 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 PRUNE1Q86TP1 453 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 TTC29Q8NA56 475 aaPredicted RBP17.12■□□□□ 0.33
SSB-206ENST00000461708 MAGEC3Q8TD91 643 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 COG1Q8WTW3 980 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 TCF12Q99081 682 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 SPSB2Q99619 263 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 KIFC1Q9BW19 673 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 ILKAPQ9H0C8 392 aaPredicted RBP17.12■□□□□ 0.33
SSB-206ENST00000461708 FBXL4Q9UKA2 621 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 TTC7AQ9ULT0 858 aaPredicted RBP17.12■□□□□ 0.33
SSB-206ENST00000461708 GUCA1BQ9UMX6 200 aa17.12■□□□□ 0.33
SSB-206ENST00000461708 H3BMM5 538 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 SOCS6O14544 535 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 ZSCAN5DPP0CG00 497 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 GRIA3P42263 894 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms