RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ACADSBP45954 432 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 GABRB2P47870 512 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 RXRGP48443 463 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 CLCN2P51788 898 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 SEC24CP53992 1094 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 MTTPP55157 894 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 RPS24P62847 133 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 DR1Q01658 176 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 TAP2Q03519 686 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 KDSRQ06136 332 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 GPS1Q13098 491 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 MAMLD1Q13495 774 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 TDGQ13569 410 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 E2F2Q14209 437 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 MEA1Q16626 185 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 CA9Q16790 459 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 KCTD19Q17RG1 926 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 FAM72AQ5TYM5 149 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 ABHD17BQ5VST6 288 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 SNX30Q5VWJ9 437 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 ABLIM2Q6H8Q1 611 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 FAM72DQ6L9T8 149 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 ARMC6Q6NXE6 501 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 FAM180BQ6P0A1 224 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 DNAJC24Q6P3W2 148 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 ALKBH5Q6P6C2 394 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 RHBDF2Q6PJF5 856 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 RTL10Q7L3V2 364 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 SLC26A9Q7LBE3 791 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 HEATR4Q86WZ0 1026 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 FAM72BQ86X60 149 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 FAM131BQ86XD5 332 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 ZNF677Q86XU0 584 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 MFSD6LQ8IWD5 586 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 ARL6IP6Q8N6S5 226 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 CCDC185Q8N715 623 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 LEMD2Q8NC56 503 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 WFDC5Q8TCV5 224 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 ABHD5Q8WTS1 349 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 WDR60Q8WVS4 1066 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 HDAC2Q92769 488 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 SYN2Q92777 582 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 AZIN2Q96A70 460 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 ELSPBP1Q96BH3 223 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 HAPLN3Q96S86 360 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 PEBP4Q96S96 227 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 NPY6RQ99463 290 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 NEU1Q99519 415 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 TRMT61BQ9BVS5 477 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 DNAI2Q9GZS0 605 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 ISCUQ9H1K1 167 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 PRDM13Q9H4Q3 707 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 CXorf36Q9H7Y0 433 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 TRPV4Q9HBA0 871 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 POPDC2Q9HBU9 364 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 PREBQ9HCU5 417 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 RASSF1Q9NS23 344 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 ABCC13Q9NSE7 274 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 DDIT4Q9NX09 232 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 DUS2Q9NX74 493 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 DLL3Q9NYJ7 618 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 CLIC5Q9NZA1 410 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 UXTQ9UBK9 157 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 DNAJB11Q9UBS4 358 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 AGO1Q9UL18 857 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 NDRG4Q9ULP0 352 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 DAPP1Q9UN19 280 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 NDRG2Q9UN36 371 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 ARHGAP26Q9UNA1 814 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 NEU2Q9Y3R4 380 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 MFHAS1Q9Y4C4 1052 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 CEP295Q9C0D2 2601 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 NUP205Q92621 2012 aa4.78□□□□□ -1.64
ATPAF1-203ENST00000460928 A0A1B0GTW7 788 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 CCDC78A2IDD5 438 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 C2CD4BA6NLJ0 364 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 SIGLEC16A6NMB1 481 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 ANKRD65E5RJM6 399 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 SPECC1L-ADORA2AF8WAN1 911 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 J3KTA2 159 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 TOR1BO14657 336 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 ZNF185O15231 689 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 BUB1O43683 1085 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 HSF2BPO75031 334 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 ECI2O75521 394 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 CNTN5O94779 1100 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 ANP32DO95626 131 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 GPANK1O95872 356 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM107AO95990 144 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 IGLV3-25P01717 112 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 TK1P04183 234 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 CALB1P05937 261 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 KRT3P12035 628 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 HGFP14210 728 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 GLULP15104 373 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 PDGFRAP16234 1089 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 PSMC3P17980 439 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms