RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 PITPNM1O00562 1244 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 HTRA2O43464 458 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-205ENST00000460170 PFKMP08237 780 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 TUBA4AP68366 448 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 TNFAIP8L2Q6P589 184 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-205ENST00000460170 OVCA2Q8WZ82 227 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 HPS1Q92902 700 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 NSUN5Q96P11 429 aaKnown RBP14.43□□□□□ -0.1
PTPRU-205ENST00000460170 CD244Q9BZW8 370 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 MARCH4Q9P2E8 410 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-205ENST00000460170 FBXW2Q9UKT8 454 aa14.43□□□□□ -0.1
PTPRU-205ENST00000460170 CD247P20963 164 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 SPIN4Q56A73 249 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 PM20D1Q6GTS8 502 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 TMPRSS11AQ6ZMR5 421 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 PGAP3Q96FM1 320 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-205ENST00000460170 GPATCH1Q9BRR8 931 aaKnown RBP14.42□□□□□ -0.1
PTPRU-205ENST00000460170 ADAMTS6Q9UKP5 1117 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 TRBV23OR9-2A0A075B6M9 112 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 IDH3BO43837 385 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 CREG1O75629 220 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 RSL1D1O76021 490 aaKnown RBP14.42□□□□□ -0.1
PTPRU-205ENST00000460170 TGFB1P01137 390 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 ALDH3A2P51648 485 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 DUOXA1Q1HG43 343 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 NEK5Q6P3R8 708 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 OR10G2Q8NGC3 310 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 LRCH3Q96II8 777 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 DHRS4Q9BTZ2 278 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 CALML5Q9NZT1 146 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-205ENST00000460170 PGRMC2O15173 223 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 COCHO43405 550 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 OR1I1O60431 355 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 GALTP07902 379 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 PRKAR1AP10644 381 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 ZNF30P17039 623 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 MAGEA6P43360 314 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 CASP9P55211 416 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 PPIGQ13427 754 aaKnown RBP eCLIP14.42□□□□□ -0.14e-7■■□□□ 14.3
PTPRU-205ENST00000460170 SCARB2Q14108 478 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 RGL4Q8IZJ4 473 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 NXPE1Q8N323 547 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 RETREG1Q9H6L5 497 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 RWDD3Q9Y3V2 267 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 GTPBP1O00178 669 aaKnown RBP14.42□□□□□ -0.1
PTPRU-205ENST00000460170 TFECO14948 347 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-205ENST00000460170 ZNF865P0CJ78 1059 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-205ENST00000460170 IL4RP24394 825 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 VIPR1P32241 457 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 NPTX1Q15818 432 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 COMMD2Q86X83 199 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 OXR1Q8N573 874 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 SLC35G5Q96KT7 338 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 CCM2Q9BSQ5 444 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 AMBNQ9NP70 447 aa14.42□□□□□ -0.1
PTPRU-205ENST00000460170 CHURC1-FNTBB4DL54 471 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 AP2A2O94973 939 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 GJB5O95377 273 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 VIPP01282 170 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 T-ENOLP0DO92 83 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 SAGP10523 405 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-205ENST00000460170 DSC3Q14574 896 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 NANOGP8Q6NSW7 305 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 LCN9Q8WX39 176 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 NUS1Q96E22 293 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 NANOGQ9H9S0 305 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 C11orf16Q9NQ32 467 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 IL36AQ9UHA7 158 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 INSL5Q9Y5Q6 135 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 PEX16Q9Y5Y5 336 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 TOR1BO14657 336 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 CHST10O43529 356 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 C8BP07358 591 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 ACRP10323 421 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 GRB7Q14451 532 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 C22orf39Q6P5X5 142 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 MBOAT1Q6ZNC8 495 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 AKAP14Q86UN6 197 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 THOC6Q86W42 341 aaKnown RBP14.41□□□□□ -0.1
PTPRU-205ENST00000460170 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-205ENST00000460170 STON2Q8WXE9 905 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 GPR62Q9BZJ7 368 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 TMEM27Q9HBJ8 222 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 SLC30A4O14863 429 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 WBP4O75554 376 aaKnown RBP14.41□□□□□ -0.1
PTPRU-205ENST00000460170 PGLSO95336 258 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 CD68P34810 354 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-205ENST00000460170 NUP62P37198 522 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-205ENST00000460170 GATMP50440 423 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 ARSDP51689 593 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 DDI2Q5TDH0 399 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 LAPTM4BQ86VI4 370 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 SLC30A8Q8IWU4 369 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 SLC35A5Q9BS91 424 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 A0A1W2PQ45 241 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-205ENST00000460170 A0A1W2PQY0 241 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 CHRNA1P02708 482 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 RPLP0P05388 317 aaKnown RBP14.41□□□□□ -0.1
PTPRU-205ENST00000460170 SRPRAP08240 638 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms