RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 CNOT3O75175 753 aaKnown RBP21.87■■□□□ 1.09
PTPN4-207ENST00000460162 MGAT1P26572 445 aa21.87■■□□□ 1.09
PTPN4-207ENST00000460162 CCNFP41002 786 aa21.87■■□□□ 1.09
PTPN4-207ENST00000460162 DCAF10Q5QP82 559 aa21.87■■□□□ 1.09
PTPN4-207ENST00000460162 YOD1Q5VVQ6 348 aaPredicted RBP21.87■■□□□ 1.09
PTPN4-207ENST00000460162 MCATQ8IVS2 390 aaKnown RBP21.87■■□□□ 1.09
PTPN4-207ENST00000460162 C2orf73Q8N5S3 287 aaPredicted RBP21.87■■□□□ 1.09
PTPN4-207ENST00000460162 HMGCLL1Q8TB92 370 aa21.87■■□□□ 1.09
PTPN4-207ENST00000460162 PNPLA2Q96AD5 504 aa21.87■■□□□ 1.09
PTPN4-207ENST00000460162 PTERQ96BW5 349 aa21.87■■□□□ 1.09
PTPN4-207ENST00000460162 MFSD3Q96ES6 412 aa21.87■■□□□ 1.09
PTPN4-207ENST00000460162 FOPNLQ96NB1 174 aa21.87■■□□□ 1.09
PTPN4-207ENST00000460162 SOX13Q9UN79 622 aa21.87■■□□□ 1.09
PTPN4-207ENST00000460162 H3BMM5 538 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 PFDN6O15212 129 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 KLHL41O60662 606 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 VAPBO95292 243 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 C1orf105O95561 183 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 ATP5DP30049 168 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 BDKRB1P46663 353 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 KCNJ1P48048 391 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 SF1Q15637 639 aaKnown RBP21.86■■□□□ 1.09
PTPN4-207ENST00000460162 TCTE1Q5JU00 501 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 CTSL3PQ5NE16 218 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 SLC6A19Q695T7 634 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 FCRL6Q6DN72 434 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 KIAA0930Q6ICG6 404 aaPredicted RBP21.86■■□□□ 1.09
PTPN4-207ENST00000460162 SDCCAG8Q86SQ7 713 aaPredicted RBP21.86■■□□□ 1.09
PTPN4-207ENST00000460162 LMNTD1Q8N9Z9 388 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 MAGEC3Q8TD91 643 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 SKA2Q8WVK7 121 aaPredicted RBP21.86■■□□□ 1.09
PTPN4-207ENST00000460162 LPGAT1Q92604 370 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 NACC2Q96BF6 587 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 ZNF285Q96NJ3 590 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 TTC7AQ9ULT0 858 aaPredicted RBP21.86■■□□□ 1.09
PTPN4-207ENST00000460162 NFS1Q9Y697 457 aa21.86■■□□□ 1.09
PTPN4-207ENST00000460162 SPTAN1Q13813 2472 aaKnown RBP21.86■■□□□ 1.09
PTPN4-207ENST00000460162 PRRC2CQ9Y520 2896 aaKnown RBP21.85■■□□□ 1.09
PTPN4-207ENST00000460162 TARM1B6A8C7 271 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 PRICKLE3O43900 615 aaPredicted RBP21.85■■□□□ 1.09
PTPN4-207ENST00000460162 CEP104O60308 925 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 ONECUT2O95948 504 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 ALPPP05187 535 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 UMODP07911 640 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 OGNP20774 298 aaKnown RBP21.85■■□□□ 1.09
PTPN4-207ENST00000460162 VARSP26640 1264 aaKnown RBP21.85■■□□□ 1.09
PTPN4-207ENST00000460162 UQCRFS1P47985 274 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 ADARP55265 1226 aaKnown RBP21.85■■□□□ 1.09
PTPN4-207ENST00000460162 GRM7Q14831 915 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 MYBPC3Q14896 1274 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 FIGLAQ6QHK4 219 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 TTLL10Q6ZVT0 673 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 PPP1R32Q7Z5V6 425 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 RBMXL3Q8N7X1 1067 aaKnown RBP21.85■■□□□ 1.09
PTPN4-207ENST00000460162 Q8NA96 180 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 ZUFSPQ96AP4 578 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 BIRC8Q96P09 236 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 TCF12Q99081 682 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 WDR54Q9H977 334 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 SLAMF7Q9NQ25 335 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 SLC22A11Q9NSA0 550 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 P4HTMQ9NXG6 502 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 SPATA7Q9P0W8 599 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 KLK4Q9Y5K2 254 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 FAM169AQ9Y6X4 670 aa21.85■■□□□ 1.09
PTPN4-207ENST00000460162 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.84■■□□□ 1.09
PTPN4-207ENST00000460162 DSCR3O14972 297 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 ALBP02768 609 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 ESR1P03372 595 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 PIM1P11309 404 aaPredicted RBP21.84■■□□□ 1.09
PTPN4-207ENST00000460162 ITGAXP20702 1163 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 ALAS2P22557 587 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 MAGEA6P43360 314 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 SARNPP82979 210 aaKnown RBP21.84■■□□□ 1.09
PTPN4-207ENST00000460162 RAPSNQ13702 412 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 GBX1Q14549 363 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 KCNJ11Q14654 390 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 CYP2A13Q16696 494 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 CNSTQ6PJW8 725 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 GALNT16Q8N428 558 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 TTC29Q8NA56 475 aaPredicted RBP21.84■■□□□ 1.09
PTPN4-207ENST00000460162 SELENOSQ9BQE4 189 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 SLC26A1Q9H2B4 701 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 CUTCQ9NTM9 273 aa21.84■■□□□ 1.09
PTPN4-207ENST00000460162 RUVBL2Q9Y230 463 aaKnown RBP21.84■■□□□ 1.09
PTPN4-207ENST00000460162 IPO13O94829 963 aaKnown RBP21.83■■□□□ 1.09
PTPN4-207ENST00000460162 ATXN8OSP0DMR3 200 aa21.83■■□□□ 1.09
PTPN4-207ENST00000460162 PAMP19021 973 aa21.83■■□□□ 1.09
PTPN4-207ENST00000460162 GNLYP22749 145 aa21.83■■□□□ 1.09
PTPN4-207ENST00000460162 GRIA3P42263 894 aa21.83■■□□□ 1.09
PTPN4-207ENST00000460162 SOX8P57073 446 aa21.83■■□□□ 1.09
PTPN4-207ENST00000460162 NAA25Q14CX7 972 aa21.83■■□□□ 1.09
PTPN4-207ENST00000460162 INPP5JQ15735 1006 aaPredicted RBP21.83■■□□□ 1.09
PTPN4-207ENST00000460162 CCSMST1Q4G0I0 132 aa21.83■■□□□ 1.09
PTPN4-207ENST00000460162 PRELID2Q8N945 189 aa21.83■■□□□ 1.09
PTPN4-207ENST00000460162 OR2L3Q8NG85 312 aa21.83■■□□□ 1.09
PTPN4-207ENST00000460162 NXT1Q9UKK6 140 aaKnown RBP21.83■■□□□ 1.09
PTPN4-207ENST00000460162 TCRBV7S3A2A0A539 114 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 FITM1A5D6W6 292 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 AGPSO00116 658 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms