RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 SDCCAG3Q96C92 435 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 OSBPL10Q9BXB5 764 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 C1QTNF3Q9BXJ4 246 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 TFB2MQ9H5Q4 396 aaKnown RBP15.39■□□□□ 0.05
CMTM3-203ENST00000460097 CATSPERBQ9H7T0 1116 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 GORASP2Q9H8Y8 452 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 FAM118AQ9NWS6 357 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 PAK1IP1Q9NWT1 392 aaPredicted RBP15.39■□□□□ 0.05
CMTM3-203ENST00000460097 UBP1Q9NZI7 540 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 SLC2A6Q9UGQ3 507 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 KIAA1549LQ6ZVL6 1849 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 FAM234BA2RU67 622 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 ASPDHA6ND91 283 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 ZNF99A8MXY4 864 aaPredicted RBP15.39■□□□□ 0.05
CMTM3-203ENST00000460097 CHURC1-FNTBB4DL54 471 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 FAM47E-STBD1D6RA91 191 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 NDUFS2O75306 463 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 KCNH1O95259 989 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 NDST3O95803 873 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 RHOCP08134 193 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 MTHFD1P11586 935 aaKnown RBP15.39■□□□□ 0.05
CMTM3-203ENST00000460097 HGFP14210 728 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 CSKP41240 450 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 PCYT1AP49585 367 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 PPP2R2BQ00005 443 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 MN1Q10571 1320 aaPredicted RBP15.39■□□□□ 0.05
CMTM3-203ENST00000460097 MTAPQ13126 283 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 HIST2H2ACQ16777 129 aaPredicted RBP15.39■□□□□ 0.05
CMTM3-203ENST00000460097 GALNT13Q8IUC8 556 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 ZDHHC13Q8IUH4 622 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 KIAA2013Q8IYS2 634 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 SPEM1Q8N4L4 309 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 DTWD2Q8NBA8 298 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 IPMKQ8NFU5 416 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 ANKRD49Q8WVL7 239 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 TMBIM1Q969X1 311 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 ATG2BQ96BY7 2078 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 RBM4BQ9BQ04 359 aaKnown RBP15.39■□□□□ 0.05
CMTM3-203ENST00000460097 RBM4Q9BWF3 364 aaKnown RBP15.39■□□□□ 0.05
CMTM3-203ENST00000460097 UGT2B28Q9BY64 529 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 POLR3BQ9NW08 1133 aaPredicted RBP15.39■□□□□ 0.05
CMTM3-203ENST00000460097 TMEM248Q9NWD8 314 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 SPATA6Q9NWH7 488 aaPredicted RBP15.39■□□□□ 0.05
CMTM3-203ENST00000460097 DNAJB9Q9UBS3 223 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 INTS6Q9UL03 887 aaKnown RBP15.39■□□□□ 0.05
CMTM3-203ENST00000460097 NEU3Q9UQ49 428 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 AP3M1Q9Y2T2 418 aa15.39■□□□□ 0.05
CMTM3-203ENST00000460097 SAGE2PA6NJ88 616 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 SLC16A6O15403 523 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 FGF10O15520 208 aaPredicted RBP15.38■□□□□ 0.05
CMTM3-203ENST00000460097 CD1DP15813 335 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 FDXRP22570 491 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 MZF1P28698 734 aaPredicted RBP15.38■□□□□ 0.05
CMTM3-203ENST00000460097 MAPKAPK2P49137 400 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 PLK1P53350 603 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 CXCR4P61073 352 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 ECT2LQ008S8 904 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 LCP2Q13094 533 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 PLEKHG6Q3KR16 790 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 FUT11Q495W5 492 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 XKR7Q5GH72 579 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 RNF219Q5W0B1 726 aaPredicted RBP15.38■□□□□ 0.05
CMTM3-203ENST00000460097 MAMSTRQ6ZN01 415 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 PRR23CQ6ZRP0 262 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 TRMT11Q7Z4G4 463 aaKnown RBP15.38■□□□□ 0.05
CMTM3-203ENST00000460097 SLCO6A1Q86UG4 719 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 APCDD1Q8J025 514 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 ATPAF2Q8N5M1 289 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 IL17RCQ8NAC3 791 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 OR7A2PQ8NGA2 310 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 OR52K2Q8NGK3 314 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 SPATA22Q8NHS9 363 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 HPS1Q92902 700 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 TUBGCP3Q96CW5 907 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 NODALQ96S42 347 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 TOR3AQ9H497 397 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 TUBB1Q9H4B7 451 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 SOX17Q9H6I2 414 aaPredicted RBP15.38■□□□□ 0.05
CMTM3-203ENST00000460097 ALG9Q9H6U8 611 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 MID1IP1Q9NPA3 183 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 SCUBE2Q9NQ36 999 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 WARS2Q9UGM6 360 aaKnown RBP15.38■□□□□ 0.05
CMTM3-203ENST00000460097 HCN2Q9UL51 889 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 PCDHGA8Q9Y5G5 932 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 HSPE1-MOB4S4R3N1 261 aa15.38■□□□□ 0.05
CMTM3-203ENST00000460097 ILVBLA1L0T0 632 aa15.37■□□□□ 0.05
CMTM3-203ENST00000460097 CCDC154A6NI56 674 aa15.37■□□□□ 0.05
CMTM3-203ENST00000460097 NPC1O15118 1278 aa15.37■□□□□ 0.05
CMTM3-203ENST00000460097 B4GAT1O43505 415 aa15.37■□□□□ 0.05
CMTM3-203ENST00000460097 SLC22A3O75751 556 aa15.37■□□□□ 0.05
CMTM3-203ENST00000460097 ANXA6P08133 673 aa15.37■□□□□ 0.05
CMTM3-203ENST00000460097 IL1RNP18510 177 aa15.37■□□□□ 0.05
CMTM3-203ENST00000460097 PPP5CP53041 499 aa15.37■□□□□ 0.05
CMTM3-203ENST00000460097 NUBP1P53384 320 aa15.37■□□□□ 0.05
CMTM3-203ENST00000460097 GP2P55259 537 aaKnown RBP15.37■□□□□ 0.05
CMTM3-203ENST00000460097 MVKQ03426 396 aa15.37■□□□□ 0.05
CMTM3-203ENST00000460097 CHRNB3Q05901 458 aa15.37■□□□□ 0.05
CMTM3-203ENST00000460097 SELENBP1Q13228 472 aa15.37■□□□□ 0.05
CMTM3-203ENST00000460097 DPY19L1Q2PZI1 675 aa15.37■□□□□ 0.05
CMTM3-203ENST00000460097 RABL3Q5HYI8 236 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms