RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 FAM60AQ9NP50 221 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 ACSS2Q9NR19 701 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 TXLNGQ9NUQ3 528 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 UTP6Q9NYH9 597 aaKnown RBP9.63□□□□□ -0.87
HDLBP-228ENST00000459788 EURLQ9NYK6 297 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 C5AR2Q9P296 337 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 GPN3Q9UHW5 284 aaPredicted RBP9.63□□□□□ -0.87
HDLBP-228ENST00000459788 NXT1Q9UKK6 140 aaKnown RBP9.63□□□□□ -0.87
HDLBP-228ENST00000459788 TP53TG5Q9Y2B4 290 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 NEU2Q9Y3R4 380 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 ZNF451Q9Y4E5 1061 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 HECTD1Q9ULT8 2610 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 SHANK1Q9Y566 2161 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 USP9XQ93008 2570 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-228ENST00000459788 A0A1B0GX78 115 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 IQCF5A8MTL0 148 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 KIF5CO60282 957 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 PSIP1O75475 530 aaKnown RBP9.62□□□□□ -0.87
HDLBP-228ENST00000459788 KLF7O75840 302 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-228ENST00000459788 TMEM63AO94886 807 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 TTC4O95801 387 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 CBSLP0DN79 551 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 PKMP14618 531 aaKnown RBP9.62□□□□□ -0.87
HDLBP-228ENST00000459788 CBSP35520 551 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 PGDP52209 483 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 CRADDP78560 199 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 FOXK1P85037 733 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 DHX34Q14147 1143 aaKnown RBP9.62□□□□□ -0.87
HDLBP-228ENST00000459788 GRM7Q14831 915 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 SF1Q15637 639 aaKnown RBP9.62□□□□□ -0.87
HDLBP-228ENST00000459788 ANKRD20A4Q4UJ75 823 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 TTC27Q6P3X3 843 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 FIGLAQ6QHK4 219 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 LDB1Q86U70 411 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-228ENST00000459788 PPIL6Q8IXY8 311 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 KRT222Q8N1A0 295 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 ZBTB2Q8N680 514 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 OTUD6BQ8N6M0 293 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 OR2Y1Q8NGV0 311 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 KCNJ9Q92806 393 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 PTERQ96BW5 349 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 FER1L6-AS2Q96M78 137 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 RUNDC3BQ96NL0 473 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 SERPINB12Q96P63 405 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 OSBPL9Q96SU4 736 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 SLC25A23Q9BV35 468 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 EPN3Q9H201 632 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 ZNF71Q9NQZ8 489 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-228ENST00000459788 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-228ENST00000459788 NDOR1Q9UHB4 597 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 FAM169AQ9Y6X4 670 aa9.62□□□□□ -0.87
HDLBP-228ENST00000459788 SPTAN1Q13813 2472 aaKnown RBP9.62□□□□□ -0.87
HDLBP-228ENST00000459788 NAV2Q8IVL1 2488 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 HIVEP3Q5T1R4 2406 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 USP9YO00507 2555 aaPredicted RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 ZCWPW2A0A1B0GU75 182 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 TCRBV7S3A2A0A539 114 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 E5RI56 91 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 MYO1CO00159 1063 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 PCDH17O14917 1159 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 DSCR3O14972 297 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 DPM1O60762 260 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 IPO13O94829 963 aaKnown RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 CCNDBP1O95273 360 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 CATP04040 527 aaKnown RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 MPC1LP0DKB6 136 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 TCP1P17987 556 aaKnown RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 MAGP20916 626 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 FMO4P31512 558 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 FOLR3P41439 243 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 CSE1LP55060 971 aaKnown RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 RPS18P62269 152 aaKnown RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 NFKB2Q00653 900 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 ILF2Q12905 390 aaKnown RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 THOC5Q13769 683 aaKnown RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 LONRF1Q17RB8 773 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 NKAIN1Q4KMZ8 207 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 LCN10Q6JVE6 187 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 PRMT9Q6P2P2 845 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 CASC4Q6P4E1 433 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 NAPRTQ6XQN6 538 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 SYDE1Q6ZW31 735 aaPredicted RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 MICALCLQ6ZW33 695 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 CENPUQ71F23 418 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 GALNT7Q86SF2 657 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 TRIM73Q86UV7 250 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 PTRH1Q86Y79 214 aaKnown RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 MCATQ8IVS2 390 aaKnown RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 REXO1L1PQ8IX06 675 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 NAT8LQ8N9F0 302 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 TTC29Q8NA56 475 aaPredicted RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 OR9A1PQ8NGU1 263 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 CFAP61Q8NHU2 1237 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 SMPDL3AQ92484 453 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 SIGLEC10Q96LC7 697 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 RUFY1Q96T51 708 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 SMAD5Q99717 465 aaKnown RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 FAM167BQ9BTA0 163 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 SPRTNQ9H040 489 aaPredicted RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 CCDC68Q9H2F9 335 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms