RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CPA3P15088 417 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 TSPAN8P19075 237 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 DGKAP23743 735 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 TEAD1P28347 426 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 AGTR2P50052 363 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 DSTNP60981 165 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 SRP54P61011 504 aaKnown RBP10.06□□□□□ -0.8
USP39-210ENST00000459775 GBX1Q14549 363 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 ACAP2Q15057 778 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 UGT3A1Q6NUS8 523 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 SLC30A9Q6PML9 568 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 LONP2Q86WA8 852 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 GALNT13Q8IUC8 556 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 SPARTQ8N0X7 666 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 CADM4Q8NFZ8 388 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 OR2L2Q8NH16 312 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 ZFAND2BQ8WV99 257 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 ASZ1Q8WWH4 475 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 TMEM159Q96B96 161 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 KLHDC7BQ96G42 594 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 TSNARE1Q96NA8 513 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 ATOH8Q96SQ7 321 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 SHCBP1LQ9BZQ2 653 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 B3GNT4Q9C0J1 378 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 SLCO1B3Q9NPD5 702 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 PRDM8Q9NQV8 689 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 PDP2Q9P2J9 529 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 COPG2Q9UBF2 871 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 KLQ9UEF7 1012 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 GPR34Q9UPC5 381 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 DMTF1Q9Y222 760 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 KMT2BQ9UMN6 2715 aaPredicted RBP10.06□□□□□ -0.8
USP39-210ENST00000459775 A0A1W2PR77 199 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 FAM221AA4D161 298 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 MGAT4DA6NG13 374 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 LYPLA1O75608 230 aaPredicted RBP10.05□□□□□ -0.8
USP39-210ENST00000459775 SLCO2B1O94956 709 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 BPGMP07738 259 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 GSTA1P08263 222 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 COL6A2P12110 1019 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 MAPK1P28482 360 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 CD38P28907 300 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 BDKRB1P46663 353 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 ETV1P50549 477 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 KIAA1024LP59773 190 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 GNGT1P63211 74 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 CTBSQ01459 385 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 CHI3L2Q15782 390 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 CCDC6Q16204 474 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 PFKFB4Q16877 469 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 ZXDCQ2QGD7 858 aaPredicted RBP10.05□□□□□ -0.8
USP39-210ENST00000459775 KYAT3Q6YP21 454 aaKnown RBP10.05□□□□□ -0.8
USP39-210ENST00000459775 IKBIPQ70UQ0 350 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 WDR5BQ86VZ2 330 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 NKAPQ8N5F7 415 aaKnown RBP10.05□□□□□ -0.8
USP39-210ENST00000459775 KIAA1191Q96A73 305 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 DUSP15Q9H1R2 295 aaPredicted RBP10.05□□□□□ -0.8
USP39-210ENST00000459775 CNOT10Q9H9A5 744 aaKnown RBP10.05□□□□□ -0.8
USP39-210ENST00000459775 DDX18Q9NVP1 670 aaKnown RBP10.05□□□□□ -0.8
USP39-210ENST00000459775 RNF112Q9ULX5 631 aa10.05□□□□□ -0.8
USP39-210ENST00000459775 SPTY2D1-AS1A0A0U1RR47 76 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 OR52A4PA6NMU1 304 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 SUPT3HB4E1H0 165 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 PPP6CO00743 305 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 KMOO15229 486 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 MAP3K7O43318 606 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 ITM2AO43736 263 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 SUPT3HO75486 399 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 TIPRLO75663 272 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 FGF3P11487 239 aaPredicted RBP10.04□□□□□ -0.8
USP39-210ENST00000459775 ZNF3P17036 446 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 HOXA6P31267 233 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 ADH7P40394 386 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 RABIFP47224 123 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 CLCNKAP51800 687 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 CORO7P57737 925 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 LPCAT2Q7L5N7 544 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 NUDCD3Q8IVD9 361 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 FAM9CQ8IZT9 166 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 ARFGAP2Q8N6H7 521 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 PPP1R14CQ8TAE6 165 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 GAB3Q8WWW8 586 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 MRPL57Q9BQC6 102 aaKnown RBP10.04□□□□□ -0.8
USP39-210ENST00000459775 FAM107BQ9H098 131 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 WWP1Q9H0M0 922 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 BATF3Q9NR55 127 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 DNAJC28Q9NX36 388 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 TBC1D29Q9UFV1 150 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 PLAGL1Q9UM63 463 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 RIF1Q5UIP0 2472 aaKnown RBP10.04□□□□□ -0.8
USP39-210ENST00000459775 A0A1B0GVT2 93 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 A8MT66 165 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 TCP11X1B4DZS4 312 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 H3BM21 787 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 AKAP10O43572 662 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 SDC3O75056 442 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 MYL2P10916 166 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 TAC1P20366 129 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 HTR1BP28222 390 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 SLC26A3P40879 764 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms