RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 PSMB5P28074 263 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 DLSTP36957 453 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 RGS4P49798 205 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 ITGA1P56199 1179 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 SF1Q15637 639 aaKnown RBP19.98■□□□□ 0.79
VARS-218ENST00000459667 CYP2A13Q16696 494 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 PRAMEF17Q5VTA0 474 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 CYHR1Q6ZMK1 362 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 PALM2Q8IXS6 379 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 FBXO15Q8NCQ5 510 aaPredicted RBP19.98■□□□□ 0.79
VARS-218ENST00000459667 FBXO25Q8TCJ0 367 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 ASB11Q8WXH4 323 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 SLC45A3Q96JT2 553 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 PKP4Q99569 1192 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 LRRC1Q9BTT6 524 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 INTS7Q9NVH2 962 aaKnown RBP19.98■□□□□ 0.79
VARS-218ENST00000459667 CROTQ9UKG9 612 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 PADI1Q9ULC6 663 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 PCDHB3Q9Y5E6 796 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 PSAT1Q9Y617 370 aa19.98■□□□□ 0.79
VARS-218ENST00000459667 ZNF891A8MT65 544 aaPredicted RBP19.97■□□□□ 0.79
VARS-218ENST00000459667 E7EQ34 232 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 ERVH48-1M5A8F1 160 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 PRICKLE3O43900 615 aaPredicted RBP19.97■□□□□ 0.79
VARS-218ENST00000459667 FKBP9O95302 570 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 SYF2O95926 243 aaKnown RBP19.97■□□□□ 0.79
VARS-218ENST00000459667 ERGP11308 486 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 GABRA4P48169 554 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 SLC7A5Q01650 507 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 FASTKQ14296 549 aaKnown RBP19.97■□□□□ 0.79
VARS-218ENST00000459667 TRADDQ15628 312 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 GLE1Q53GS7 698 aaKnown RBP19.97■□□□□ 0.79
VARS-218ENST00000459667 HECTD2Q5U5R9 776 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 FAM45BPQ6NSW5 357 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 PAQR3Q6TCH7 311 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 ZDHHC24Q6UX98 284 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 SLC26A11Q86WA9 606 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 FAM45AQ8TCE6 357 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 EEF1AKMT1Q8WVE0 214 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 SLC12A9Q9BXP2 914 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 PHACTR1Q9C0D0 580 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 IL17BQ9UHF5 180 aa19.97■□□□□ 0.79
VARS-218ENST00000459667 SPTBP11277 2137 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 A0A1W2PPV9 198 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 ESYT3A0FGR9 886 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 GFYI3L273 518 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 HCRTR1O43613 425 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 ZBTB14O43829 449 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 SSTR1P30872 391 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 CYP4F2P78329 520 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 GPS2Q13227 327 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 PDAP1Q13442 181 aaKnown RBP19.96■□□□□ 0.79
VARS-218ENST00000459667 ARHGAP19Q14CB8 494 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 UBE2R2Q712K3 238 aaPredicted RBP19.96■□□□□ 0.79
VARS-218ENST00000459667 STRA8Q7Z7C7 330 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 CCDC25Q86WR0 208 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 GPR135Q8IZ08 494 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 MYO1HQ8N1T3 1032 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 DNAJC22Q8N4W6 341 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 CT55Q8WUE5 264 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 SMPDL3AQ92484 453 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 STARD8Q92502 1023 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 TTC9Q92623 222 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 CLIP3Q96DZ5 547 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 BBC3Q96PG8 261 aaPredicted RBP19.96■□□□□ 0.79
VARS-218ENST00000459667 MIPEPQ99797 713 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 SLC7A5P2Q9GIP4 190 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 ACTR5Q9H9F9 607 aaPredicted RBP19.96■□□□□ 0.79
VARS-218ENST00000459667 NSMCE4AQ9NXX6 385 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 VWA7Q9Y334 891 aa19.96■□□□□ 0.79
VARS-218ENST00000459667 MGAQ8IWI9 3026 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 ZNF839A8K0R7 811 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 TERTO14746 1132 aaKnown RBP19.95■□□□□ 0.78
VARS-218ENST00000459667 ATXN7O15265 892 aaPredicted RBP19.95■□□□□ 0.78
VARS-218ENST00000459667 OR2B3O76000 313 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 FDXRP22570 491 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 F8A1P23610 371 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 HSD17B2P37059 387 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 PNLIPRP1P54315 467 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 GUCY2DQ02846 1103 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 DNASE1L3Q13609 305 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 TSTA3Q13630 321 aaPredicted RBP19.95■□□□□ 0.78
VARS-218ENST00000459667 SOWAHCQ53LP3 525 aaPredicted RBP19.95■□□□□ 0.78
VARS-218ENST00000459667 TAF1BQ53T94 588 aaPredicted RBP19.95■□□□□ 0.78
VARS-218ENST00000459667 FIGLAQ6QHK4 219 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 CEP128Q6ZU80 1094 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 ZC3HC1Q86WB0 502 aaKnown RBP19.95■□□□□ 0.78
VARS-218ENST00000459667 SLC38A9Q8NBW4 561 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 OR2L3Q8NG85 312 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 OR2A1Q8NGT9 310 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 LINGO1Q96FE5 620 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 LRFN5Q96NI6 719 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 OLFM1Q99784 485 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 FAM129AQ9BZQ8 928 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 AKIRIN1Q9H9L7 192 aaPredicted RBP19.95■□□□□ 0.78
VARS-218ENST00000459667 KCND3Q9UK17 655 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 PLCL2Q9UPR0 1127 aa19.95■□□□□ 0.78
VARS-218ENST00000459667 MRPS18BQ9Y676 258 aaKnown RBP19.95■□□□□ 0.78
VARS-218ENST00000459667 IGSF10Q6WRI0 2623 aa19.94■□□□□ 0.78
VARS-218ENST00000459667 ZNF749O43361 778 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms