RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 LIPJQ5W064 366 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 FRG2Q64ET8 278 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 OR10A6Q8NH74 314 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 WFIKKN2Q8TEU8 576 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 BADQ92934 168 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 GLMNQ92990 594 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 FCRL1Q96LA6 429 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 FRG2BQ96QU4 278 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 THUMPD3Q9BV44 507 aaKnown RBP16.23■□□□□ 0.19
CCDC43-202ENST00000457422 TRIM4Q9C037 500 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 PAIP1Q9H074 479 aaKnown RBP16.23■□□□□ 0.19
CCDC43-202ENST00000457422 IKZF5Q9H5V7 419 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 CLK4Q9HAZ1 481 aaKnown RBP16.23■□□□□ 0.19
CCDC43-202ENST00000457422 SMPD3Q9NY59 655 aaPredicted RBP16.23■□□□□ 0.19
CCDC43-202ENST00000457422 A0A096LPI6 279 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 TMEM202A6NGA9 273 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 C16orf96A6NNT2 1141 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 VILLO15195 856 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 CLOCKO15516 846 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 HOXB9P17482 250 aaPredicted RBP16.22■□□□□ 0.19
CCDC43-202ENST00000457422 SDC1P18827 310 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 PHC1P78364 1004 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 DHCR24Q15392 516 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 KCTD21Q4G0X4 260 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 TCEAL5Q5H9L2 206 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 ATG9BQ674R7 924 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 FBXO46Q6PJ61 603 aaPredicted RBP16.22■□□□□ 0.19
CCDC43-202ENST00000457422 RBM44Q6ZP01 1051 aaKnown RBP16.22■□□□□ 0.19
CCDC43-202ENST00000457422 MSANTD1Q6ZTZ1 278 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 KLHDC8AQ8IYD2 350 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 ZNF784Q8NCA9 323 aaPredicted RBP16.22■□□□□ 0.19
CCDC43-202ENST00000457422 LRRC3BQ96PB8 259 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 ATG10Q9H0Y0 220 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 SERHLQ9NQF3 203 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 DMTF1Q9Y222 760 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 ELOVL7A1L3X0 281 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 PSMD11O00231 422 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 ZNF197O14709 1029 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 DEAF1O75398 565 aaPredicted RBP16.22■□□□□ 0.19
CCDC43-202ENST00000457422 POU2F2P09086 479 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 RPS9P46781 194 aaKnown RBP16.22■□□□□ 0.19
CCDC43-202ENST00000457422 NRIP1P48552 1158 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 PRLHRP49683 370 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 FPGSQ05932 587 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 GTDC1Q4AE62 458 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 TMEM240Q5SV17 173 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 LIPIQ6XZB0 460 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 RAVER1Q8IY67 606 aaKnown RBP16.22■□□□□ 0.19
CCDC43-202ENST00000457422 NRSN1Q8IZ57 195 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 KIAA1958Q8N8K9 716 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 GLYATL1Q969I3 302 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 UGT2B28Q9BY64 529 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 KAT8Q9H7Z6 458 aaKnown RBP16.22■□□□□ 0.19
CCDC43-202ENST00000457422 RMND5AQ9H871 391 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 CAAP1Q9H8G2 361 aa16.22■□□□□ 0.19
CCDC43-202ENST00000457422 TRIM64A6NGJ6 449 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 ARHGEF33A8MVX0 844 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 FAM220BPB1ANY3 271 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 UPK1AO00322 258 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 TSPAN6O43657 245 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 SCELO95171 688 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 CYP17A1P05093 508 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 GNAO1P09471 354 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 AMD1P17707 334 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 S100A3P33764 101 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 MAPK9P45984 424 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 DGKGP49619 791 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 CHRNB3Q05901 458 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 PCDH1Q08174 1060 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 CSTF3Q12996 717 aaKnown RBP16.21■□□□□ 0.19
CCDC43-202ENST00000457422 CHIT1Q13231 466 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 CAMK1Q14012 370 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 CWF19L1Q69YN2 538 aaKnown RBP16.21■□□□□ 0.19
CCDC43-202ENST00000457422 FKBP9P1Q75LS8 142 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 CYP2U1Q7Z449 544 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 C12orf40Q86WS4 652 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 CALHM3Q86XJ0 350 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 CSGALNACT1Q8TDX6 532 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 ATL1Q8WXF7 558 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 APIPQ96GX9 242 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 CPPED1Q9BRF8 314 aaPredicted RBP16.21■□□□□ 0.19
CCDC43-202ENST00000457422 NTN4Q9HB63 628 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 VCX3AQ9NNX9 186 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 ITM2BQ9Y287 266 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 RWDD3Q9Y3V2 267 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 PCDHB14Q9Y5E9 798 aa16.21■□□□□ 0.19
CCDC43-202ENST00000457422 SLC5A10A0PJK1 596 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 TRIM64CA6NLI5 447 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 GSTA4O15217 222 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 HOXC11O43248 304 aaPredicted RBP16.2■□□□□ 0.18
CCDC43-202ENST00000457422 ATG13O75143 517 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 ELFN1P0C7U0 828 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 TACR1P25103 407 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 PTPN6P29350 595 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 CAPGP40121 348 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 HALP42357 657 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 ALDH3B2P48448 385 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 CTSCP53634 463 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.2■□□□□ 0.18
CCDC43-202ENST00000457422 ERAP2Q6P179 960 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms