RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 SMN1Q16637 294 aaKnown RBP12.12□□□□□ -0.47
LINC00959-201ENST00000456581 MPPE1Q53F39 396 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 SPANXN4Q5MJ08 99 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 BROXQ5VW32 411 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 GOLGA7Q7Z5G4 137 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 MSRB3Q8IXL7 192 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 TMCO5AQ8N6Q1 288 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 CHST14Q8NCH0 376 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 OR56A4Q8NGH8 313 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 FIBINQ8TAL6 211 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 SLC35B4Q969S0 331 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 NCLNQ969V3 563 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 ASB8Q9H765 288 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 RIC8BQ9NVN3 520 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 MBD1Q9UIS9 605 aaPredicted RBP12.12□□□□□ -0.47
LINC00959-201ENST00000456581 ZNF701M0R085 212 aaPredicted RBP12.12□□□□□ -0.47
LINC00959-201ENST00000456581 VPS26AO75436 327 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 ANXA6P08133 673 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 EPHA2P29317 976 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 CHRNB3Q05901 458 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 DGCR6Q14129 220 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 POM121L1PQ3SYA9 428 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 Q6ZVU0 165 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 THAP5Q7Z6K1 395 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 ZDHHC13Q8IUH4 622 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 SLC7A5P1Q8MH63 180 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 ZNF366Q8N895 744 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 OR2T12Q8NG77 320 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 NDNFQ8TB73 568 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 RPL3LQ92901 407 aaKnown RBP12.12□□□□□ -0.47
LINC00959-201ENST00000456581 CLP1Q92989 425 aaKnown RBP12.12□□□□□ -0.47
LINC00959-201ENST00000456581 CIPCQ9C0C6 399 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 POPDC3Q9HBV1 291 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 ELOVL2Q9NXB9 296 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 VNN3Q9NY84 501 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 KIAA1522Q9P206 1035 aaPredicted RBP12.12□□□□□ -0.47
LINC00959-201ENST00000456581 HECAQ9UBI9 543 aaPredicted RBP12.12□□□□□ -0.47
LINC00959-201ENST00000456581 KLQ9UEF7 1012 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 PNMA8BQ9ULN7 279 aaPredicted RBP12.12□□□□□ -0.47
LINC00959-201ENST00000456581 WNT6Q9Y6F9 365 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 PMF1-BGLAPU3KQ54 211 aa12.12□□□□□ -0.47
LINC00959-201ENST00000456581 CFAP99D6REC4 459 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 ANKRD28O15084 1053 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 GSTA4O15217 222 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 TRIM16O95361 564 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 GGT1P19440 569 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 FMO3P31513 532 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 GP2P55259 537 aaKnown RBP12.11□□□□□ -0.47
LINC00959-201ENST00000456581 IL2P60568 153 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 AP1S1P61966 158 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 CAMK1Q14012 370 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 CHRNA6Q15825 494 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 MOGQ16653 247 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 AASDHQ4L235 1098 aaPredicted RBP12.11□□□□□ -0.47
LINC00959-201ENST00000456581 PDCD4Q53EL6 469 aaKnown RBP12.11□□□□□ -0.47
LINC00959-201ENST00000456581 CRTC3Q6UUV7 619 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 DPY19L3Q6ZPD9 716 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 ADGRG2Q8IZP9 1017 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 C8orf59Q8N0T1 100 aaPredicted RBP12.11□□□□□ -0.47
LINC00959-201ENST00000456581 CADM3Q8N126 398 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 ELMOD1Q8N336 334 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 MRPL43Q8N983 215 aaKnown RBP12.11□□□□□ -0.47
LINC00959-201ENST00000456581 Q8N9G6 341 aaPredicted RBP12.11□□□□□ -0.47
LINC00959-201ENST00000456581 GFM2Q969S9 779 aaKnown RBP12.11□□□□□ -0.47
LINC00959-201ENST00000456581 ZDHHC6Q9H6R6 413 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 MAGEE1Q9HCI5 957 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 INSL6Q9Y581 213 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 TRIM64BA6NI03 449 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 TLL1O43897 1013 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 ABCB7O75027 752 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 DEAF1O75398 565 aaPredicted RBP12.11□□□□□ -0.47
LINC00959-201ENST00000456581 UGT2B4P06133 528 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 RHOP08100 348 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 RAP2AP10114 183 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 MYCLP1P12525 358 aaPredicted RBP12.11□□□□□ -0.47
LINC00959-201ENST00000456581 PSMA3P25788 255 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 EIF2B2P49770 351 aaKnown RBP12.11□□□□□ -0.47
LINC00959-201ENST00000456581 CLCN4P51793 760 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 CLCN7P51798 805 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 SIM2Q14190 667 aaPredicted RBP12.11□□□□□ -0.47
LINC00959-201ENST00000456581 CDKN3Q16667 212 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 FAM98BQ52LJ0 330 aaKnown RBP12.11□□□□□ -0.47
LINC00959-201ENST00000456581 COQ5Q5HYK3 327 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 TMEM215Q68D42 235 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 CCDC149Q6ZUS6 474 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 FRA10AC1Q70Z53 315 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 DET1Q7L5Y6 550 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 GPR26Q8NDV2 337 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 OR2AP1Q8NGE2 309 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 CYB5D2Q8WUJ1 264 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 TAMM41Q96BW9 452 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 SLC47A1Q96FL8 570 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 LMLNQ96KR4 655 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 BBS2Q9BXC9 721 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 IPPKQ9H8X2 491 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 HPS4Q9NQG7 708 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 CD84Q9UIB8 345 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 ERGIC3Q9Y282 383 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 TRIOO75962 3097 aa12.11□□□□□ -0.47
LINC00959-201ENST00000456581 MTCL1Q9Y4B5 1905 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms