RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 OR2A14Q96R47 310 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 NUDT9Q9BW91 350 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 C20orf96Q9NUD7 363 aaPredicted RBP12.47□□□□□ -0.41
TREX1-203ENST00000456089 SERTAD3Q9UJW9 196 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 KLHL20Q9Y2M5 609 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 CRYL1Q9Y2S2 319 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 MRFAP1Q9Y605 127 aa12.47□□□□□ -0.41
TREX1-203ENST00000456089 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.47□□□□□ -0.41
TREX1-203ENST00000456089 ESPL1Q14674 2120 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 PCM1Q15154 2024 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 BLACEA4D250 179 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 USP1O94782 785 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 ESR1P03372 595 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 CHRM5P08912 532 aaPredicted RBP12.46□□□□□ -0.41
TREX1-203ENST00000456089 RAB40ALP0C0E4 278 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 AOAHP28039 575 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 ACADLP28330 430 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 CD97P48960 835 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 NCF4Q15080 339 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 LONRF1Q17RB8 773 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 TYSND1Q2T9J0 566 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 RNASEH2BQ5TBB1 312 aaKnown RBP12.46□□□□□ -0.41
TREX1-203ENST00000456089 MLIPQ5VWP3 458 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 ZNF385CQ66K41 422 aaPredicted RBP12.46□□□□□ -0.41
TREX1-203ENST00000456089 ZNF470Q6ECI4 717 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 TAX1BP1Q86VP1 789 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 ATCAYQ86WG3 371 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 CILP2Q8IUL8 1156 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 VRK3Q8IV63 474 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 SLC22A15Q8IZD6 547 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 RAB42Q8N4Z0 105 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 FAM26EQ8N5C1 309 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 LKAAEAR1Q8TD35 194 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 SEC14L1Q92503 715 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 N4BP2L2Q92802 583 aaPredicted RBP12.46□□□□□ -0.41
TREX1-203ENST00000456089 SLCO2A1Q92959 643 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 P2RY12Q9H244 342 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 INTS10Q9NVR2 710 aaKnown RBP12.46□□□□□ -0.41
TREX1-203ENST00000456089 DHCR7Q9UBM7 475 aaKnown RBP12.46□□□□□ -0.41
TREX1-203ENST00000456089 SLC39A10Q9ULF5 831 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 CDYLQ9Y232 598 aa12.46□□□□□ -0.41
TREX1-203ENST00000456089 ICE1Q9Y2F5 2266 aa12.46□□□□□ -0.42
TREX1-203ENST00000456089 USP9YO00507 2555 aaPredicted RBP12.45□□□□□ -0.42
TREX1-203ENST00000456089 ISM1B1AKI9 464 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 H3BMH7 237 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 NDC80O14777 642 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 OR2B3O76000 313 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 SLCO2B1O94956 709 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 PGAM1P18669 254 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 ARNTP27540 789 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 GABRA4P48169 554 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 KYNUQ16719 465 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 UNC5DQ6UXZ4 953 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 DCUN1D3Q8IWE4 304 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 LMNTD2Q8IXW0 634 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 GPR135Q8IZ08 494 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 PDIK1LQ8N165 341 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 ZNF655Q8N720 491 aaPredicted RBP12.45□□□□□ -0.42
TREX1-203ENST00000456089 EFCAB3Q8N7B9 438 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.45□□□□□ -0.42
TREX1-203ENST00000456089 MAGEC3Q8TD91 643 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 LPGAT1Q92604 370 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 FAM167BQ9BTA0 163 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 NAT9Q9BTE0 207 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 SYTL2Q9HCH5 934 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 MLXIPLQ9NP71 852 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 IRAK4Q9NWZ3 460 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 IL1RAPL1Q9NZN1 696 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 OR6C2Q9NZP2 312 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 MAP10Q9P2G4 905 aa12.45□□□□□ -0.42
TREX1-203ENST00000456089 PCDHGA9Q9Y5G4 932 aaKnown RBP12.45□□□□□ -0.42
TREX1-203ENST00000456089 RP1L1Q8IWN7 2480 aaPredicted RBP12.44□□□□□ -0.42
TREX1-203ENST00000456089 A0A0J9YY10 115 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 KRT87PA6NCN2 255 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 C9J4A7 227 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 SMAPO00193 183 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 CNOT3O75175 753 aaKnown RBP12.44□□□□□ -0.42
TREX1-203ENST00000456089 VPS4BO75351 444 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 GPC4O75487 556 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 KLF7O75840 302 aaPredicted RBP12.44□□□□□ -0.42
TREX1-203ENST00000456089 CEACAM4O75871 244 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 SORBS2O94875 1100 aaKnown RBP12.44□□□□□ -0.42
TREX1-203ENST00000456089 TTC4O95801 387 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 MSL3P1P0C860 447 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 PKMP14618 531 aaKnown RBP12.44□□□□□ -0.42
TREX1-203ENST00000456089 MAGEA3P43357 314 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 ADARP55265 1226 aaKnown RBP12.44□□□□□ -0.42
TREX1-203ENST00000456089 MORF4L2Q15014 288 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 TTLL9Q3SXZ7 439 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 BBS9Q3SYG4 887 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 Q8NA96 180 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 FAM136AQ96C01 138 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 SIGLEC10Q96LC7 697 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 IL17FQ96PD4 163 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 KRT12Q99456 494 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 TRIM56Q9BRZ2 755 aaKnown RBP12.44□□□□□ -0.42
TREX1-203ENST00000456089 RAB11FIP5Q9BXF6 653 aa12.44□□□□□ -0.42
TREX1-203ENST00000456089 PPANQ9NQ55 473 aaKnown RBP12.44□□□□□ -0.42
TREX1-203ENST00000456089 TSR3Q9UJK0 312 aaKnown RBP12.44□□□□□ -0.42
TREX1-203ENST00000456089 VPS4AQ9UN37 437 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms