RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 EPORP19235 508 aa13.27□□□□□ -0.28
CLK3-203ENST00000454830 RPL10P27635 214 aaKnown RBP13.27□□□□□ -0.28
CLK3-203ENST00000454830 PFN3P60673 137 aa13.27□□□□□ -0.28
CLK3-203ENST00000454830 FAM124AQ86V42 546 aa13.27□□□□□ -0.28
CLK3-203ENST00000454830 GLMNQ92990 594 aa13.27□□□□□ -0.28
CLK3-203ENST00000454830 AURKBQ96GD4 344 aaPredicted RBP13.27□□□□□ -0.28
CLK3-203ENST00000454830 NSMCE2Q96MF7 247 aa13.27□□□□□ -0.28
CLK3-203ENST00000454830 GPATCH1Q9BRR8 931 aaKnown RBP13.27□□□□□ -0.28
CLK3-203ENST00000454830 ACTL8Q9H568 366 aa13.27□□□□□ -0.28
CLK3-203ENST00000454830 CLDND1Q9NY35 253 aa13.27□□□□□ -0.28
CLK3-203ENST00000454830 DYRK1BQ9Y463 629 aa13.27□□□□□ -0.28
CLK3-203ENST00000454830 GNG14A0A1W2PPG7 69 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 MAGEA13PA6NCF6 341 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 MYO1DO94832 1006 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 ZNF8P17098 575 aaPredicted RBP13.27□□□□□ -0.29
CLK3-203ENST00000454830 TACR1P25103 407 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 MEF2AQ02078 507 aaPredicted RBP13.27□□□□□ -0.29
CLK3-203ENST00000454830 TLR1Q15399 786 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 GAB4Q2WGN9 574 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 ITPRIPL2Q3MIP1 535 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 SYCE2Q6PIF2 218 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 ZBTB49Q6ZSB9 765 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 OR10A6Q8NH74 314 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 TSPEARQ8WU66 669 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 SNX19Q92543 992 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 RNF145Q96MT1 663 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 IL17FQ96PD4 163 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 OSBPL6Q9BZF3 934 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 TRIM39Q9HCM9 518 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 RIMS3Q9UJD0 308 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 C15orf38-AP3S2A0A0A6YYH1 394 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 PSMD11O00231 422 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 AREL1O15033 823 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 CPSF4O95639 269 aaKnown RBP13.27□□□□□ -0.29
CLK3-203ENST00000454830 SLC7A1P30825 629 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 OR4D2P58180 307 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 SELPLGQ14242 412 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 RBBP5Q15291 538 aaKnown RBP13.27□□□□□ -0.29
CLK3-203ENST00000454830 GTDC1Q4AE62 458 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 AASDHQ4L235 1098 aaPredicted RBP13.27□□□□□ -0.29
CLK3-203ENST00000454830 C6orf52Q5T4I8 152 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 ARPINQ7Z6K5 226 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 FBXL8Q96CD0 374 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 VPS35Q96QK1 796 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 OR1A2Q9Y585 309 aa13.27□□□□□ -0.29
CLK3-203ENST00000454830 MAPK1P28482 360 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 GRIA2P42262 883 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 SLC6A12P48065 614 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 CDKL1Q00532 357 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 OGFRL1Q5TC84 451 aaPredicted RBP13.26□□□□□ -0.29
CLK3-203ENST00000454830 GLYATQ6IB77 296 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 OR14C36Q8NHC7 312 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 CSGALNACT1Q8TDX6 532 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 COQ10BQ9H8M1 238 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 ALPK3Q96L96 1907 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 PRSS51A0A1B0GVH4 220 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 PLOD1Q02809 727 aaPredicted RBP13.26□□□□□ -0.29
CLK3-203ENST00000454830 ADNP2Q6IQ32 1131 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 CAPN13Q6MZZ7 669 aaPredicted RBP13.26□□□□□ -0.29
CLK3-203ENST00000454830 CHST15Q7LFX5 561 aaPredicted RBP13.26□□□□□ -0.29
CLK3-203ENST00000454830 TMEM245Q9H330 911 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 VAPAQ9P0L0 249 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 INVSQ9Y283 1065 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 PCDHA9Q9Y5H5 950 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 AP4B1Q9Y6B7 739 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 SAP18O00422 153 aaKnown RBP13.26□□□□□ -0.29
CLK3-203ENST00000454830 SPINT1O43278 529 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 FOXM1Q08050 763 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 SGCGQ13326 291 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 PWP1Q13610 501 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 CST6Q15828 149 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 COQ5Q5HYK3 327 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 CDKL4Q5MAI5 379 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 CAPRIN2Q6IMN6 1127 aaKnown RBP13.26□□□□□ -0.29
CLK3-203ENST00000454830 ANGPTL8Q6UXH0 198 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 PHACTR4Q8IZ21 702 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 ADCY4Q8NFM4 1077 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 FBXO30Q8TB52 745 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 HCAR2Q8TDS4 363 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 HIC2Q96JB3 615 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 VPS50Q96JG6 964 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 ACTR3BQ9P1U1 418 aa13.26□□□□□ -0.29
CLK3-203ENST00000454830 THAP10Q9P2Z0 257 aaPredicted RBP13.26□□□□□ -0.29
CLK3-203ENST00000454830 SCN8AQ9UQD0 1980 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 SLC5A10A0PJK1 596 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 ARHGAP10A1A4S6 786 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 H0Y858 1186 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 AXIN1O15169 862 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 LATO43561 262 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 PRAMEF4O60810 478 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 B3GALT4O96024 378 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 FCARP24071 287 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 FASP25445 335 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 IMPA1P29218 277 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 OXTRP30559 389 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 HYAL1Q12794 435 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 KRT33BQ14525 404 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 PDK3Q15120 406 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 PRAMEF9Q5VWM5 478 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 ANKRD26P1Q6NSI1 321 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms