RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TMED1Q13445 227 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 BOP1Q14137 746 aaKnown RBP15.46■□□□□ 0.06
SNX17-204ENST00000453453 SPATS1Q496A3 300 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 PLEKHS1Q5SXH7 462 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 PPP4R4Q6NUP7 873 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 SLC36A4Q6YBV0 504 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 FSTL5Q8N475 847 aaPredicted RBP15.46■□□□□ 0.06
SNX17-204ENST00000453453 GALNT4Q8N4A0 578 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 SPATA6LQ8N4H0 392 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 ASZ1Q8WWH4 475 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 SNX19Q92543 992 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 FOXJ1Q92949 421 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 FUBP1Q96AE4 644 aaKnown RBP15.46■□□□□ 0.06
SNX17-204ENST00000453453 CNDP2Q96KP4 475 aaKnown RBP15.46■□□□□ 0.06
SNX17-204ENST00000453453 SLC30A3Q99726 388 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 TMEM98Q9Y2Y6 226 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 HS3ST3A1Q9Y663 406 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 K7ESF4 209 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 TOR1BO14657 336 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 STAMBPO95630 424 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 HOXC4P09017 264 aaPredicted RBP15.45■□□□□ 0.06
SNX17-204ENST00000453453 BMP2P12643 396 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 CD1DP15813 335 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 ZNF12P17014 697 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 ZNF8P17098 575 aaPredicted RBP15.45■□□□□ 0.06
SNX17-204ENST00000453453 ATP4BP51164 291 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 CTSCP53634 463 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 KIAA1024LP59773 190 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 DNAJB13P59910 316 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 PHEXP78562 749 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 SQLEQ14534 574 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 INTS11Q5TA45 600 aaKnown RBP15.45■□□□□ 0.06
SNX17-204ENST00000453453 CHSY3Q70JA7 882 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 GPR141Q7Z602 305 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 LRRTM4Q86VH4 590 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 EEF1AKMT1Q8WVE0 214 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 BORCS5Q969J3 196 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 TMEM159Q96B96 161 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 PDLIM5Q96HC4 596 aaKnown RBP15.45■□□□□ 0.06
SNX17-204ENST00000453453 GPR78Q96P69 363 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 UNKQ9C0B0 810 aaKnown RBP15.45■□□□□ 0.06
SNX17-204ENST00000453453 TFB2MQ9H5Q4 396 aaKnown RBP15.45■□□□□ 0.06
SNX17-204ENST00000453453 RMI1Q9H9A7 625 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 ARMC1Q9NVT9 282 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 XPR1Q9UBH6 696 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 PCDHGB4Q9UN71 923 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 PCDHGB5Q9Y5G0 923 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 PCDHGA4Q9Y5G9 962 aa15.45■□□□□ 0.06
SNX17-204ENST00000453453 COPG1Q9Y678 874 aaKnown RBP15.45■□□□□ 0.06
SNX17-204ENST00000453453 C7orf72A4D263 438 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 BTN3A1O00481 513 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 LAMTOR5O43504 91 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 PI15O43692 258 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 SGTAO43765 313 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 NUAK1O60285 661 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 IGHV4-34P06331 123 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 HTR1BP28222 390 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 EPHA3P29320 983 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 PBLDP30039 288 aaPredicted RBP15.44■□□□□ 0.06
SNX17-204ENST00000453453 HOXA6P31267 233 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 CCR7P32248 378 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 DPP6P42658 865 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 PKNOX1P55347 436 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 YPEL5P62699 121 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 GK3PQ14409 553 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 TECRLQ5HYJ1 363 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 SAMD4BQ5PRF9 694 aaKnown RBP15.44■□□□□ 0.06
SNX17-204ENST00000453453 IL23RQ5VWK5 629 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 FAM160A2Q8N612 972 aaPredicted RBP15.44■□□□□ 0.06
SNX17-204ENST00000453453 BEND7Q8N7W2 519 aaPredicted RBP15.44■□□□□ 0.06
SNX17-204ENST00000453453 CADM4Q8NFZ8 388 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 BIRC7Q96CA5 298 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 ITPKCQ96DU7 683 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 DOK1Q99704 481 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 LGR4Q9BXB1 951 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 YTHDF1Q9BYJ9 559 aaKnown RBP15.44■□□□□ 0.06
SNX17-204ENST00000453453 TRIM15Q9C019 465 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 ALG9Q9H6U8 611 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 COQ10BQ9H8M1 238 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 TBC1D23Q9NUY8 699 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 OLAHQ9NV23 265 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 TMEM9Q9P0T7 183 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 PCDHGA7Q9Y5G6 932 aa15.44■□□□□ 0.06
SNX17-204ENST00000453453 DNMT3AQ9Y6K1 912 aaPredicted RBP15.44■□□□□ 0.06
SNX17-204ENST00000453453 CCDC163A0A0D9SF12 145 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 TRIM64BA6NI03 449 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 C10orf142B7Z368 130 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 KMOO15229 486 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 CFLARO15519 480 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 PLOD1Q02809 727 aaPredicted RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 RPL6Q02878 288 aaKnown RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 HSPA14Q0VDF9 509 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 PDCD4Q53EL6 469 aaKnown RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 ARL13AQ5H913 290 aaPredicted RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 CRTC3Q6UUV7 619 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 PIWIL4Q7Z3Z4 852 aaKnown RBP15.43■□□□□ 0.06
SNX17-204ENST00000453453 GPR180Q86V85 440 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 RHEBL1Q8TAI7 183 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 FAM174AQ8TBP5 190 aa15.43■□□□□ 0.06
SNX17-204ENST00000453453 STAG3L4Q8TBR4 150 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms