RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 PCDH20Q8N6Y1 951 aaKnown RBP5.9□□□□□ -1.47
KARSP1-201ENST00000451871 RBMXL3Q8N7X1 1067 aaKnown RBP5.9□□□□□ -1.47
KARSP1-201ENST00000451871 LSMEM1Q8N8F7 131 aa5.9□□□□□ -1.47
KARSP1-201ENST00000451871 CXorf40AQ8TE69 158 aa5.9□□□□□ -1.47
KARSP1-201ENST00000451871 OR1E3Q8WZA6 343 aa5.9□□□□□ -1.47
KARSP1-201ENST00000451871 PNPLA2Q96AD5 504 aa5.9□□□□□ -1.47
KARSP1-201ENST00000451871 FAM149B1Q96BN6 582 aa5.9□□□□□ -1.47
KARSP1-201ENST00000451871 SLC7A6OSQ96CW6 309 aaPredicted RBP5.9□□□□□ -1.47
KARSP1-201ENST00000451871 EEF2KMTQ96G04 330 aa5.9□□□□□ -1.47
KARSP1-201ENST00000451871 BRD8Q9H0E9 1235 aa5.9□□□□□ -1.47
KARSP1-201ENST00000451871 VPS16Q9H269 839 aa5.9□□□□□ -1.47
KARSP1-201ENST00000451871 ZDHHC6Q9H6R6 413 aa5.9□□□□□ -1.47
KARSP1-201ENST00000451871 SPATS2LQ9NUQ6 558 aaKnown RBP5.9□□□□□ -1.47
KARSP1-201ENST00000451871 VANGL2Q9ULK5 521 aa5.9□□□□□ -1.47
KARSP1-201ENST00000451871 OR1A2Q9Y585 309 aa5.9□□□□□ -1.47
KARSP1-201ENST00000451871 CLIC4Q9Y696 253 aa5.9□□□□□ -1.47
KARSP1-201ENST00000451871 PMF1-BGLAPU3KQ54 211 aa5.9□□□□□ -1.47
KARSP1-201ENST00000451871 CACNA1CQ13936 2221 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 TMEM202A6NGA9 273 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 ZSCAN5CA6NGD5 496 aaPredicted RBP5.89□□□□□ -1.47
KARSP1-201ENST00000451871 A8MU76 341 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 J3KTA2 159 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 POLR1CO15160 346 aaPredicted RBP5.89□□□□□ -1.47
KARSP1-201ENST00000451871 PPM1DO15297 605 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 LRRTM2O43300 516 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 ZG16O60844 167 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 INMTO95050 263 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 TRUB2O95900 331 aaKnown RBP5.89□□□□□ -1.47
KARSP1-201ENST00000451871 IGLV3-25P01717 112 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 FGF1P05230 155 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 RHOCP08134 193 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 TRIM49P0CI25 452 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 TRIM49CP0CI26 452 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 VDRP11473 427 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 FDXRP22570 491 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 SLC6A2P23975 617 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 GKP32189 559 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 POLD2P49005 469 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 DRG2P55039 364 aaKnown RBP5.89□□□□□ -1.47
KARSP1-201ENST00000451871 CDH4P55283 916 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 ADAM8P78325 824 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 PITX1P78337 314 aaPredicted RBP5.89□□□□□ -1.47
KARSP1-201ENST00000451871 CHAF1BQ13112 559 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 CHRNA6Q15825 494 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 VWA3BQ502W6 1294 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 LRRC73Q5JTD7 316 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 ATPAF1Q5TC12 328 aaPredicted RBP5.89□□□□□ -1.47
KARSP1-201ENST00000451871 LCLAT1Q6UWP7 414 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 ARHGAP22Q7Z5H3 698 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 SLC47A2Q86VL8 602 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 RASGRP3Q8IV61 690 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 OTUD6BQ8N6M0 293 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 DCAF4L2Q8NA75 395 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 OR56A4Q8NGH8 313 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 SEMA4DQ92854 862 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 HSFY1Q96LI6 401 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 C7orf26Q96N11 449 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 KLHL32Q96NJ5 620 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 MED15Q96RN5 788 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 MESP1Q9BRJ9 268 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 MMRN2Q9H8L6 949 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 KRT84Q9NSB2 600 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 HPSEQ9Y251 543 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 FRMD4BQ9Y2L6 1034 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 SPTBP11277 2137 aa5.89□□□□□ -1.47
KARSP1-201ENST00000451871 E7EVH7 732 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 STX16-NPEPL1H3BU86 382 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 STX16O14662 325 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 NR3C1P04150 777 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 JUNP05412 331 aaKnown RBP5.88□□□□□ -1.47
KARSP1-201ENST00000451871 SLC2A3P11169 496 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 ZNF28P17035 718 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 CHRM3P20309 590 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 GZMKP49863 264 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 HDAC4P56524 1084 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 SSPNQ14714 243 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 ZIK1Q3SY52 487 aaPredicted RBP5.88□□□□□ -1.47
KARSP1-201ENST00000451871 C5orf22Q49AR2 442 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 MANEALQ5VSG8 457 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 ATG16L1Q676U5 607 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 ANKRD40Q6AI12 368 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 PPP1R32Q7Z5V6 425 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 KRT77Q7Z794 578 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 KRT73Q86Y46 540 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 IQCKQ8N0W5 287 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 PDPRQ8NCN5 879 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 OR6K2Q8NGY2 324 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 PATE1Q8WXA2 126 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 SCAMP4Q969E2 229 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 VOPP1Q96AW1 172 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 RNF31Q96EP0 1072 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 SIGLEC10Q96LC7 697 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 PWWP2AQ96N64 755 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 GPHA2Q96T91 129 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 WRAP53Q9BUR4 548 aaKnown RBP5.88□□□□□ -1.47
KARSP1-201ENST00000451871 ULBP3Q9BZM4 244 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 TM6SF2Q9BZW4 377 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 ENKD1Q9H0I2 346 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 ING2Q9H160 280 aa5.88□□□□□ -1.47
KARSP1-201ENST00000451871 SLC25A32Q9H2D1 315 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms