RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 NEK2P51955 445 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 PPP2CBP62714 309 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 PPP2CAP67775 309 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 IRX1P78414 480 aaPredicted RBP6.39□□□□□ -1.39
USP46-202ENST00000451218 CDK3Q00526 305 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 NFE2L1Q14494 772 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 IL23RQ5VWK5 629 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 LCN8Q6JVE9 175 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 UBE2R2Q712K3 238 aaPredicted RBP6.39□□□□□ -1.39
USP46-202ENST00000451218 DHDDSQ86SQ9 333 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 LAS2Q8IYD9 372 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 ADGRG5Q8IZF4 528 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 NUS1Q96E22 293 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 ZNF583Q96ND8 569 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 ASPSCR1Q9BZE9 553 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 CD274Q9NZQ7 290 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 LHX6Q9UPM6 363 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 NUP210LQ5VU65 1888 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 PRAMEF33A0A0G2JMD5 474 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 A0A1B0GTW7 788 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 C17orf113A0A1B0GUU1 675 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 TRIM64A6NGJ6 449 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 E5RI56 91 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 SOX1O00570 391 aaPredicted RBP6.39□□□□□ -1.39
USP46-202ENST00000451218 RNASEH1O60930 286 aaKnown RBP6.39□□□□□ -1.39
USP46-202ENST00000451218 ATP6V1C1P21283 382 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 NFKBIAP25963 317 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 POLR2LP62875 67 aaKnown RBP6.39□□□□□ -1.39
USP46-202ENST00000451218 TRIM25Q14258 630 aaKnown RBP6.39□□□□□ -1.39
USP46-202ENST00000451218 UGT8Q16880 541 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 LDLRAP1Q5SW96 308 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 ICE2Q659A1 982 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 TTC23LQ6PF05 361 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 NEIL2Q969S2 332 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 CCM2Q9BSQ5 444 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 C1QTNF2Q9BXJ5 285 aa6.39□□□□□ -1.39
USP46-202ENST00000451218 RPF2Q9H7B2 306 aaKnown RBP6.39□□□□□ -1.39
USP46-202ENST00000451218 A6NHS1 94 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 BBIP1A8MTZ0 92 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 CEACAM5P06731 702 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 ELFN1P0C7U0 828 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 SMIM18P0DKX4 95 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 CYP2A6P11509 494 aaPredicted RBP6.38□□□□□ -1.39
USP46-202ENST00000451218 DGKQP52824 942 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 AQP4P55087 323 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 IRF4Q15306 451 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 GTDC1Q4AE62 458 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 NANOGP8Q6NSW7 305 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 CAMKMTQ7Z624 323 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 NANOGQ9H9S0 305 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 CIDEBQ9UHD4 219 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 TSC22D4Q9Y3Q8 395 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 CELSR3Q9NYQ7 3312 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 LAMA5O15230 3695 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 FAM234BA2RU67 622 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 NARSO43776 548 aaKnown RBP6.38□□□□□ -1.39
USP46-202ENST00000451218 BCKDHAP12694 445 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 JUPP14923 745 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 ADPRHP54922 357 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 TAP2Q03519 686 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 FOXM1Q08050 763 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 OR52E8Q6IFG1 317 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 MYO1HQ8N1T3 1032 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 ANKRD53Q8N9V6 530 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 BHLHE22Q8NFJ8 381 aaPredicted RBP6.38□□□□□ -1.39
USP46-202ENST00000451218 ATP6V1E2Q96A05 226 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 AP2M1Q96CW1 435 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 CCT7Q99832 543 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 SLC29A3Q9BZD2 475 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 ARMC1Q9NVT9 282 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 SCHIP1Q9P0W5 487 aaPredicted RBP6.38□□□□□ -1.39
USP46-202ENST00000451218 DEC1Q9P2X7 70 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 GPR34Q9UPC5 381 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 SLC17A4Q9Y2C5 497 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 PLEKHM1Q9Y4G2 1056 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 IGLON5A6NGN9 336 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 C2CD4DB7Z1M9 353 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 TRIM38O00635 465 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 INPP4BO15327 924 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 UGDHO60701 494 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 KATNA1O75449 491 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 STK16O75716 305 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 OTCP00480 354 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 PRNPP04156 253 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 TNFRSF4P43489 277 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 HNMTP50135 292 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 TRAP1Q12931 704 aaKnown RBP6.38□□□□□ -1.39
USP46-202ENST00000451218 CST6Q15828 149 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 ZNF385BQ569K4 471 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 METRNLQ641Q3 311 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 GRHL2Q6ISB3 625 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 RALGPS2Q86X27 583 aaPredicted RBP6.38□□□□□ -1.39
USP46-202ENST00000451218 ADGRF3Q8IZF5 1079 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 MIER2Q8N344 545 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 CPA6Q8N4T0 437 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 ZNF548Q8NEK5 533 aaPredicted RBP6.38□□□□□ -1.39
USP46-202ENST00000451218 CHTF18Q8WVB6 975 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 IGFLR1Q9H665 355 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 ZFP14Q9HCL3 533 aa6.38□□□□□ -1.39
USP46-202ENST00000451218 PRKAB1Q9Y478 270 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms