RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 GAB2Q9UQC2 676 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 TRAPPC4Q9Y296 219 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 NDUFAF1Q9Y375 327 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 MFHAS1Q9Y4C4 1052 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PCDHGB1Q9Y5G3 927 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PSAT1Q9Y617 370 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 FKBP7Q9Y680 259 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 RNF215Q9Y6U7 377 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PMF1-BGLAPU3KQ54 211 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PAPPAQ13219 1627 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 NHSL1Q5SYE7 1610 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLX4Q8IY92 1834 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 SCN11AQ9UI33 1791 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 IRS2Q9Y4H2 1338 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 DDX60LQ5H9U9 1706 aaKnown RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 NUP188Q5SRE5 1749 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 A0A087X0T9 212 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 A0A0G2JNJ9 132 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 C9orf170A2RU37 121 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 OR6C74A6NCV1 312 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 TRABD2BA6NFA1 517 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 MYMKA6NI61 221 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 ACOD1A6NK06 481 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 EFCAB7A8K855 629 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 E9PAM4 449 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 hCG_1984214I3L0E3 225 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 F2RL2O00254 374 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 CACNB4O00305 520 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 RTCAO00442 366 aaKnown RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 TRIM38O00635 465 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 ACOT8O14734 319 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 SYN3O14994 580 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 NPC1O15118 1278 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZBTB43O43298 467 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 PRAMEF4O60810 478 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 SNNO75324 88 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 SURF6O75683 361 aaKnown RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 CBR3O75828 277 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 SCO1O75880 301 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 BCAS2O75934 225 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC22A5O76082 557 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 IPO13O94829 963 aaKnown RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 TRIM16O95361 564 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 CNOT4O95628 575 aaKnown RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 C1QBP02746 253 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 FABP1P07148 127 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 PLA2G4BP0C869 781 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 COX5BP10606 129 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 CYP2D6P10635 497 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 ITGAMP11215 1152 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 HNRNPLP14866 589 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 DARSP14868 501 aaKnown RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZNF250P15622 560 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 PAX1P15863 534 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 SPNP16150 400 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 CHRNB2P17787 502 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 SPI1P17947 270 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 TNFAIP3P21580 790 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 CBLP22681 906 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 MMP8P22894 467 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 FBLN1P23142 703 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 EPHA3P29320 983 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 CCND2P30279 289 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 CHRNA5P30532 468 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 EPHX2P34913 555 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 CRHR1P34998 444 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 RPA3P35244 121 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 ADRA1BP35368 520 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 QARSP47897 775 aaKnown RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 FLT3LGP49771 235 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 RGS19P49795 217 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 KLK7P49862 253 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 SERPINH1P50454 418 aaKnown RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 SUCLG1P53597 346 aaKnown RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 ACTR2P61160 394 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 YBX1P67809 324 aaKnown RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 PRKCDQ05655 676 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC18A2Q05940 514 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 RGS1Q08116 209 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 FOXO1Q12778 655 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 TRAF2Q12933 501 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 ADAM15Q13444 863 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 DNASE1L3Q13609 305 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 PTK6Q13882 451 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 CAMK1Q14012 370 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 EFR3AQ14156 821 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZNF169Q14929 603 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 NFIXQ14938 502 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 CLCA4Q14CN2 919 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 PON2Q15165 354 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 STXBP2Q15833 593 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 MICBQ29980 383 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 MICAQ29983 383 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 HKDC1Q2TB90 917 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC36A3Q495N2 470 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 MCMDC2Q4G0Z9 681 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 LBHQ53QV2 105 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 FBXO48Q5FWF7 155 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 PABPC1L2AQ5JQF8 200 aa3.54□□□□□ -1.84
HMGB3P8-201ENST00000449709 METTL24Q5JXM2 366 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms