RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 SPINT3P49223 89 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 ABHD18Q0P651 414 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 SP140Q13342 867 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 PRAMEF9Q5VWM5 478 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 ANKRD34AQ69YU3 496 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 SPESP1Q6UW49 350 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 MSANTD1Q6ZTZ1 278 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 R3HCC1LQ7Z5L2 792 aaKnown RBP16.48■□□□□ 0.23
TOM1-210ENST00000449058 TMCO2Q7Z6W1 182 aaPredicted RBP16.48■□□□□ 0.23
TOM1-210ENST00000449058 CROCCP3Q8IVE0 287 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 CHPFQ8IZ52 775 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 CHDHQ8NE62 594 aaPredicted RBP16.48■□□□□ 0.23
TOM1-210ENST00000449058 ZNF555Q8NEP9 628 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 ZNF641Q96N77 438 aaPredicted RBP16.48■□□□□ 0.23
TOM1-210ENST00000449058 BRD9Q9H8M2 597 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 LTB4R2Q9NPC1 389 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 LTBP2Q14767 1821 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 A0A1W2PPW3 197 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 SLC16A5O15375 505 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 BNIP3LO60238 219 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 LILRB3O75022 631 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 RECQL5O94762 991 aaPredicted RBP16.48■□□□□ 0.23
TOM1-210ENST00000449058 GSNP06396 782 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 HIST1H2AGP0C0S8 130 aaPredicted RBP16.48■□□□□ 0.23
TOM1-210ENST00000449058 HIST1H2ADP20671 130 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 MATN1P21941 496 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 CDKN2CP42773 168 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 ENTPD1P49961 510 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 GALK1P51570 392 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 ATN1P54259 1190 aaPredicted RBP16.48■□□□□ 0.23
TOM1-210ENST00000449058 TMBIM6P55061 237 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 KCNAB2Q13303 367 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 TUBA3CQ13748 450 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 SKIV2LQ15477 1246 aaKnown RBP16.48■□□□□ 0.23
TOM1-210ENST00000449058 FGD3Q5JSP0 725 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 PLEKHS1Q5SXH7 462 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 C6orf141Q5SZD1 244 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 EID3Q8N140 333 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 APIPQ96GX9 242 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 HIST1H2AHQ96KK5 128 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 HIST1H2AJQ99878 128 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 H2AFJQ9BTM1 129 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 TRAV19A0A0A6YYK7 116 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 LEFTY2O00292 366 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 POP4O95707 220 aaKnown RBP16.47■□□□□ 0.23
TOM1-210ENST00000449058 B3GALT4O96024 378 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 IL7RP16871 459 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 LAG3P18627 525 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 CARD16Q5EG05 197 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 DPY19L3Q6ZPD9 716 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 ZNF551Q7Z340 670 aaPredicted RBP16.47■□□□□ 0.23
TOM1-210ENST00000449058 ANKRD46Q86W74 232 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 PYCR2Q96C36 320 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 PYURFQ96I23 114 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 FCRL1Q96LA6 429 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 P2RY13Q9BPV8 354 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 ZDHHC6Q9H6R6 413 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 GPRC5BQ9NZH0 403 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 B4GALT6Q9UBX8 382 aa16.47■□□□□ 0.23
TOM1-210ENST00000449058 MYCLP1P12525 358 aaPredicted RBP16.46■□□□□ 0.23
TOM1-210ENST00000449058 ATP1B2P14415 290 aaPredicted RBP16.46■□□□□ 0.23
TOM1-210ENST00000449058 AMD1P17707 334 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 GSTM2P28161 218 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 MAGEA2P43356 314 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 GABARAPL2P60520 117 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 MTAPQ13126 283 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 CTU2Q2VPK5 515 aaKnown RBP16.46■□□□□ 0.23
TOM1-210ENST00000449058 PGS1Q32NB8 556 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 KLHL35Q6PF15 583 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 ELMSAN1Q6PJG2 1045 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 DET1Q7L5Y6 550 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 RBM23Q86U06 439 aaKnown RBP16.46■□□□□ 0.23
TOM1-210ENST00000449058 RASGRP3Q8IV61 690 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 RNF217Q8TC41 542 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 LZICQ8WZA0 190 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 SNX19Q92543 992 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 CEP44Q9C0F1 390 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 ADNPQ9H2P0 1102 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.46■□□□□ 0.23
TOM1-210ENST00000449058 DNAJC11Q9NVH1 559 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 GALNT8Q9NY28 637 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 TMEFF2Q9UIK5 374 aaPredicted RBP16.46■□□□□ 0.23
TOM1-210ENST00000449058 MYOFQ9NZM1 2061 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 UGT2B4P06133 528 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 AP1S2P56377 157 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 CD47Q08722 323 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 ZC3H12BQ5HYM0 836 aaKnown RBP16.46■□□□□ 0.23
TOM1-210ENST00000449058 FRG2Q64ET8 278 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 GTF2IRD2BQ6EKJ0 949 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 ASTLQ6HA08 431 aaPredicted RBP16.46■□□□□ 0.23
TOM1-210ENST00000449058 LAIR2Q6ISS4 152 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 CES5AQ6NT32 575 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 GTF2IRD2Q86UP8 949 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 SPARTQ8N0X7 666 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 SKA2Q8WVK7 121 aaPredicted RBP16.46■□□□□ 0.23
TOM1-210ENST00000449058 EGLN2Q96KS0 407 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 FRG2BQ96QU4 278 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 BEGAINQ9BUH8 593 aa16.46■□□□□ 0.23
TOM1-210ENST00000449058 GPBP1L1Q9HC44 474 aaPredicted RBP16.46■□□□□ 0.23
TOM1-210ENST00000449058 C3orf18Q9UK00 162 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms