RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 NDNQ99608 321 aa12.27□□□□□ -0.45
PRPF40A-203ENST00000448428 ARHGAP9Q9BRR9 750 aa12.27□□□□□ -0.45
PRPF40A-203ENST00000448428 ERP44Q9BS26 406 aa12.27□□□□□ -0.45
PRPF40A-203ENST00000448428 CHST8Q9H2A9 424 aa12.27□□□□□ -0.45
PRPF40A-203ENST00000448428 ACTR5Q9H9F9 607 aaPredicted RBP12.27□□□□□ -0.45
PRPF40A-203ENST00000448428 PPANQ9NQ55 473 aaKnown RBP12.27□□□□□ -0.45
PRPF40A-203ENST00000448428 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.27□□□□□ -0.45
PRPF40A-203ENST00000448428 SLC17A6Q9P2U8 582 aa12.27□□□□□ -0.45
PRPF40A-203ENST00000448428 KCND3Q9UK17 655 aa12.27□□□□□ -0.45
PRPF40A-203ENST00000448428 ANKRD12Q6UB98 2062 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 SEC16AO15027 2179 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 A0A1W2PPV9 198 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 FAM187AA6NFU0 413 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 C21orf140B9A014 251 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 E7EQ34 232 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 E7ESA3 106 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 MYO1CO00159 1063 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 MEN1O00255 615 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 RAD51CO43502 376 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 VPS26AO75436 327 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 CREG1O75629 220 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 OR2B3O76000 313 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 KLK3P07288 261 aaPredicted RBP12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 FURINP09958 794 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 FAM87AP0C7U9 286 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 MPC1LP0DKB6 136 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 CBSLP0DN79 551 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 PSMB5P28074 263 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 RORAP35398 523 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 CBSP35520 551 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 GRIA3P42263 894 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 PDIA2Q13087 525 aaKnown RBP12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 ERV3-1Q14264 604 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 FASTKQ14296 549 aaKnown RBP12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 STEAP4Q687X5 459 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 FCRL6Q6DN72 434 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 BORAQ6PGQ7 559 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 FIGLAQ6QHK4 219 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 KIAA0408Q6ZU52 694 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 MAATS1Q7Z4T9 603 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 CPNE9Q8IYJ1 553 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 GPR135Q8IZ08 494 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 RAB42Q8N4Z0 105 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 OR2A1Q8NGT9 310 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 GABPB2Q8TAK5 448 aaPredicted RBP12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 ASB11Q8WXH4 323 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 CATSPER2Q96P56 530 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 PKP4Q99569 1192 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 GPR87Q9BY21 358 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 DPH5Q9H2P9 285 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 PCMTD2Q9NV79 361 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 PLCL2Q9UPR0 1127 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 FER1L5A0AVI2 2057 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 ATMQ13315 3056 aa12.26□□□□□ -0.45
PRPF40A-203ENST00000448428 GFYI3L273 518 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 FKBP9O95302 570 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 RECKO95980 971 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 CATP04040 527 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 CAPN1P07384 714 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 ERGP11308 486 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 ENO3P13929 434 aaPredicted RBP12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 MCM3P25205 808 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 PTPN4P29074 926 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 SKIV2L2P42285 1042 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 RPS18P62269 152 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 RPS15P62841 145 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 YBX1P67809 324 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 C19orf57Q0VDD7 668 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 CBLBQ13191 982 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 COL9A2Q14055 689 aaPredicted RBP12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 FASTKD3Q14CZ7 662 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 DEFB109BQ30KR1 87 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 RBM20Q5T481 1227 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 DUPD1Q68J44 220 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 PIWIL4Q7Z3Z4 852 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 GALNT7Q86SF2 657 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 MCATQ8IVS2 390 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 BBOF1Q8ND07 529 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 FBXO36Q8NEA4 188 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 OR2L3Q8NG85 312 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 EEF1AKMT1Q8WVE0 214 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 ZUFSPQ96AP4 578 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 SLC7A5P2Q9GIP4 190 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 ACTL8Q9H568 366 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 FAM114A2Q9NRY5 505 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 INTS7Q9NVH2 962 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 EURLQ9NYK6 297 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 SPATA7Q9P0W8 599 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 WHRNQ9P202 907 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 FARSAQ9Y285 508 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 AP1M2Q9Y6Q5 423 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 HEATR5BQ9P2D3 2071 aa12.25□□□□□ -0.45
PRPF40A-203ENST00000448428 TARM1B6A8C7 271 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 NDC80O14777 642 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 ZBTB14O43829 449 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 SLC16A8O95907 504 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 HBQ1P09105 142 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 CCR10P46092 362 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 PGGT1BP53609 377 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 CDKN2DP55273 166 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms