RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 ZNF773Q6PK81 442 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 TMEM220Q6QAJ8 160 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ASB18Q6ZVZ8 466 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ZC3HC1Q86WB0 502 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 GALNT13Q8IUC8 556 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 TMEM126BQ8IUX1 230 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 TOMM5Q8N4H5 51 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 OR2L5Q8NG80 312 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 OR13C4Q8NGS5 318 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 GEMIN6Q8WXD5 167 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 ZC3H10Q96K80 434 aaKnown RBP7.62□□□□□ -1.19
NEDD9-204ENST00000448183 KCNC2Q96PR1 638 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 MIPEPQ99797 713 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 SPATA7Q9P0W8 599 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 CDH7Q9ULB5 785 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 MEMO1Q9Y316 297 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 BCL9LQ86UU0 1499 aa7.62□□□□□ -1.19
NEDD9-204ENST00000448183 C3P01024 1663 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 A0A1W2PP18 115 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 OR2AT4A6NND4 320 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ABCB7O75027 752 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ECI2O75521 394 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ALPPP05187 535 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ITGB1P05556 798 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 SRPRAP08240 638 aaKnown RBP7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF806P0C7X5 589 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 GSTM3P21266 225 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ECHS1P30084 290 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 NRLP54845 237 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 CD83Q01151 205 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 NCBP2-AS2Q69YL0 99 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 KIAA1161Q6NSJ0 714 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ARMC10Q8N2F6 343 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 COX18Q8N8Q8 333 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF420Q8TAQ5 688 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-204ENST00000448183 CLEC4CQ8WTT0 213 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 COL21A1Q96P44 957 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 KXD1Q9BQD3 176 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 HEPHQ9BQS7 1158 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 TAPBPLQ9BX59 468 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 MIR1-1HGQ9H1L0 117 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 FZD8Q9H461 694 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 TBCCD1Q9NVR7 557 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 COL20A1Q9P218 1284 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 VPS29Q9UBQ0 182 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 FBXL21Q9UKT6 434 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ABCG2Q9UNQ0 655 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 NR2E3Q9Y5X4 410 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ARL5AQ9Y689 179 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 MAU2Q9Y6X3 613 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 DUXAA6NLW8 204 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 TMEM233B4DJY2 109 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 I3L521 148 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ENPP3O14638 875 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 SYN3O14994 580 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 IRAK2O43187 625 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 TREHO43280 583 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 CPNE3O75131 537 aaKnown RBP7.61□□□□□ -1.19
NEDD9-204ENST00000448183 NIPSNAP2O75323 286 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF823P16415 610 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ENGP17813 658 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 PDHA2P29803 388 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 MAGEA2P43356 314 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 DGKQP52824 942 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 PLA2G16P53816 162 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 UBXN11Q5T124 520 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 TREML2Q5T2D2 321 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 TXNRD3NBQ6F5E7 133 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 TIFABQ6ZNK6 161 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 NATD1Q8N6N6 113 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 C15orf40Q8WUR7 153 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF641Q96N77 438 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-204ENST00000448183 CDK15Q96Q40 435 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 GPR22Q99680 433 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 TUBA1CQ9BQE3 449 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 EFCAB11Q9BUY7 163 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 LGR4Q9BXB1 951 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 IRF2BPLQ9H1B7 796 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 FZD4Q9ULV1 537 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 MED31Q9Y3C7 131 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 OR51F1A6NGY5 319 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 OR1I1O60431 355 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ITGA10O75578 1167 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 DEFA5Q01523 94 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 MC1RQ01726 317 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 PPP1R8Q12972 351 aaKnown RBP7.61□□□□□ -1.19
NEDD9-204ENST00000448183 SPATS1Q496A3 300 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 C4orf46Q504U0 113 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 PLCZ1Q86YW0 608 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF548Q8NEK5 533 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-204ENST00000448183 OR2L3Q8NG85 312 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 OR5T3Q8NGG3 340 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 OR6K6Q8NGW6 343 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 SLC22A17Q8WUG5 538 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 PLD4Q96BZ4 506 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 AURKBQ96GD4 344 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-204ENST00000448183 CDKN2AIPNLQ96HQ2 116 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 C12orf66Q96MD2 445 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 MAPKAP1Q9BPZ7 522 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 DPAGT1Q9H3H5 408 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms