RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 TSPAN7P41732 249 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 MAPK10P53779 464 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 TSTA3Q13630 321 aaPredicted RBP12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 BMPR2Q13873 1038 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 NAA25Q14CX7 972 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 UNQ6494/PRO21346Q6UXR6 183 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 TAX1BP1Q86VP1 789 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 C2orf73Q8N5S3 287 aaPredicted RBP12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 LINC01555Q8NAE3 123 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 ANKRD49Q8WVL7 239 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 ATL1Q8WXF7 558 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 GATA6Q92908 595 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 SLC41A2Q96JW4 573 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 SLC46A1Q96NT5 459 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 OR2A14Q96R47 310 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 NRTNQ99748 197 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 PITPNM3Q9BZ71 974 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 ASPSCR1Q9BZE9 553 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 CCDC86Q9H6F5 360 aaKnown RBP12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 SNX15Q9NRS6 342 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 ARL15Q9NXU5 204 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 SPHK1Q9NYA1 384 aa12.64□□□□□ -0.39
ERGIC3-209ENST00000447986 IQANK1A0A1B0GTG1 560 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 BRINP1O60477 761 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 SNRPAP09012 282 aaKnown RBP12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 CCL4P13236 92 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 CCND1P24385 295 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 RPA3P35244 121 aaPredicted RBP12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 ERVPABLB-1P60509 514 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 ACY1Q03154 408 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 FOXM1Q08050 763 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 CSHL1Q14406 222 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 DCAF12Q5T6F0 453 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 KLC3Q6P597 504 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 CMC1Q7Z7K0 106 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 DENND1AQ8TEH3 1009 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 ZNF480Q8WV37 535 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 DCAKDQ8WVC6 231 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 MTBPQ96DY7 904 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 ZNF578Q96N58 590 aaPredicted RBP12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 TEFMQ96QE5 360 aaKnown RBP12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 TAAR9Q96RI9 348 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 B3GNT4Q9C0J1 378 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 FANCEQ9HB96 536 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 NMRAL1Q9HBL8 299 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 PDE7BQ9NP56 450 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 FBXO8Q9NRD0 319 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 SLC39A1Q9NY26 324 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 DKK4Q9UBT3 224 aa12.63□□□□□ -0.39
ERGIC3-209ENST00000447986 KRT87PA6NCN2 255 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 TMEM8BA6NDV4 472 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 NPEPPSL1A6NEC2 478 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 SLC9B1P1A6NJY1 282 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 POLR1CO15160 346 aaPredicted RBP12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 CCNDBP1O95273 360 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 WISP3O95389 354 aaPredicted RBP12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 C2P06681 752 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 ANXA5P08758 320 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 LTA4HP09960 611 aaKnown RBP12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 SLC35E2BP0CK96 405 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 FGF3P11487 239 aaPredicted RBP12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 IMPA1P29218 277 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 CMPK1P30085 196 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 MC2RQ01718 297 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 CYP4F3Q08477 520 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 IL11RAQ14626 422 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 PHKG1Q16816 387 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 FAM83EQ2M2I3 478 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 THEMIS2Q5TEJ8 643 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 ADGRD1Q6QNK2 874 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 CEACAM20Q6UY09 585 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 BPHLQ86WA6 291 aaPredicted RBP12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 SPNS2Q8IVW8 549 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 AENQ8WTP8 325 aaKnown RBP12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 DLG3Q92796 817 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 N4BP2L2Q92802 583 aaPredicted RBP12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 CAVIN3Q969G5 261 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 TCTN2Q96GX1 697 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 UBXN10Q96LJ8 280 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 TSNARE1Q96NA8 513 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 TRAPPC9Q96Q05 1148 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 EGFL8Q99944 293 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 ZPBPQ9BS86 351 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 DHRS4Q9BTZ2 278 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 DDA1Q9BW61 102 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 TWSG1Q9GZX9 223 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 CCDC177Q9NQR7 707 aaPredicted RBP12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 OCIAD1Q9NX40 245 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 UTP6Q9NYH9 597 aaKnown RBP12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 STOX2Q9P2F5 926 aaPredicted RBP12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 PSMC3IPQ9P2W1 217 aaPredicted RBP12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 RAB21Q9UL25 225 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 BTRCQ9Y297 605 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 OARD1Q9Y530 152 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 PCDHGA7Q9Y5G6 932 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 SPTBN2O15020 2390 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 A0A096LPK6 155 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 A0A1W2PNU3 283 aaPredicted RBP12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 HMX2A2RU54 273 aa12.62□□□□□ -0.39
ERGIC3-209ENST00000447986 C1QTNF9BB2RNN3 333 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms