RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 GRAP2O75791 330 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 BMP15O95972 392 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 PYGLP06737 847 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 ITGAXP20702 1163 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 PTGS2P35354 604 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 STAT6P42226 847 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 CEBPZQ03701 1054 aaKnown RBP3.1□□□□□ -1.91
PMS1-215ENST00000447232 SLC9A5Q14940 896 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 MEA1Q16626 185 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 HYAL4Q2M3T9 481 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 SLC25A35Q3KQZ1 300 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 FILIP1LQ4L180 1135 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 C1orf189Q5VU69 101 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 TMEM270Q6UE05 265 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 C12orf54Q6X4T0 127 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 UNC5AQ6ZN44 842 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 BNIPLQ7Z465 357 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 SRLQ86TD4 932 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 LGI4Q8N135 537 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 SIRT6Q8N6T7 355 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 MDS2Q8NDY4 140 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 EXD1Q8NHP7 514 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 CCDC110Q8TBZ0 833 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 SCAMP4Q969E2 229 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 FKBP10Q96AY3 582 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 AP2M1Q96CW1 435 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 PERPQ96FX8 193 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 SLC7A5P2Q9GIP4 190 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 CARD9Q9H257 536 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 SLC26A1Q9H2B4 701 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 CATSPERBQ9H7T0 1116 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 L2HGDHQ9H9P8 463 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 PDFQ9HBH1 243 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 ZNF160Q9HCG1 818 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 SOHLH2Q9NX45 425 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 SLC23A2Q9UGH3 650 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 DNAI1Q9UI46 699 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 PLA2G2DQ9UNK4 145 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 COQ4Q9Y3A0 265 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 SRPRBQ9Y5M8 271 aaKnown RBP3.1□□□□□ -1.91
PMS1-215ENST00000447232 NPIPB15A6NHN6 443 aaPredicted RBP3.1□□□□□ -1.91
PMS1-215ENST00000447232 PDXKO00764 312 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 FFAR3O14843 346 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 TTI1O43156 1089 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 BMP10O95393 424 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 ASMTLO95671 621 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 TP53P04637 393 aaPredicted RBP3.1□□□□□ -1.91
PMS1-215ENST00000447232 SERPINA7P05543 415 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 DBHP09172 617 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 PAX1P15863 534 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 ZNF16P17020 682 aaPredicted RBP3.1□□□□□ -1.91
PMS1-215ENST00000447232 TACR1P25103 407 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 PTGER1P34995 402 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 ZFP36L2P47974 494 aaKnown RBP3.1□□□□□ -1.91
PMS1-215ENST00000447232 MXI1P50539 228 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 PDCLQ13371 301 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 TNK1Q13470 666 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 FBXW10Q5XX13 1052 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 DENND2CQ68D51 928 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 DENND1BQ6P3S1 775 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 PAQR3Q6TCH7 311 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 OLFML1Q6UWY5 402 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 UNC13DQ70J99 1090 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 TSPAN33Q86UF1 283 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 TTC30BQ8N4P2 665 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 FAM184AQ8NB25 1140 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 MAPK1IP1LQ8NDC0 245 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 ZNF397Q8NF99 534 aaPredicted RBP3.1□□□□□ -1.91
PMS1-215ENST00000447232 GPR150Q8NGU9 434 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 CXorf40BQ96DE9 158 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 VPS50Q96JG6 964 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 MCCC1Q96RQ3 725 aaPredicted RBP3.1□□□□□ -1.91
PMS1-215ENST00000447232 SH3GL2Q99962 352 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 OSGEPL1Q9H4B0 414 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 MMRN2Q9H8L6 949 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 SLC39A2Q9NP94 309 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 LUC7LQ9NQ29 371 aaKnown RBP3.1□□□□□ -1.91
PMS1-215ENST00000447232 PLCB1Q9NQ66 1216 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 FANCLQ9NW38 375 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 HRASLS2Q9NWW9 162 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 TMEM160Q9NX00 188 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 DHCR7Q9UBM7 475 aaKnown RBP3.1□□□□□ -1.91
PMS1-215ENST00000447232 CD84Q9UIB8 345 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 GNPTGQ9UJJ9 305 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 FBXO2Q9UK22 296 aaPredicted RBP3.1□□□□□ -1.91
PMS1-215ENST00000447232 DNAJC16Q9Y2G8 782 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 FRMD4BQ9Y2L6 1034 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 NPFFR2Q9Y5X5 522 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 AP1M2Q9Y6Q5 423 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 RAI1Q7Z5J4 1906 aaPredicted RBP3.1□□□□□ -1.91
PMS1-215ENST00000447232 A0A0G2JNJ9 132 aa3.09□□□□□ -1.91
PMS1-215ENST00000447232 A0A1B0GTH9 108 aa3.09□□□□□ -1.91
PMS1-215ENST00000447232 PDZK1P1A8MUH7 402 aa3.09□□□□□ -1.91
PMS1-215ENST00000447232 CHUKO15111 745 aa3.09□□□□□ -1.91
PMS1-215ENST00000447232 SHOX2O60902 331 aaPredicted RBP3.09□□□□□ -1.91
PMS1-215ENST00000447232 ZNF8P17098 575 aaPredicted RBP3.09□□□□□ -1.91
PMS1-215ENST00000447232 LIMS1P48059 325 aa3.09□□□□□ -1.91
PMS1-215ENST00000447232 GABRA4P48169 554 aa3.09□□□□□ -1.91
PMS1-215ENST00000447232 KRTAP10-2P60368 255 aa3.09□□□□□ -1.91
PMS1-215ENST00000447232 FANCCQ00597 558 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms